Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24f19
(737 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051646-1|AAK93070.1| 235|Drosophila melanogaster GM14348p pro... 31 1.2
AE014134-1137|AAF52422.1| 235|Drosophila melanogaster CG11329-P... 31 1.2
BT021249-1|AAX33397.1| 998|Drosophila melanogaster RE60631p pro... 31 1.6
AE014297-2206|AAF55313.2| 1067|Drosophila melanogaster CG12753-P... 31 1.6
AE014297-2205|ABC66179.1| 998|Drosophila melanogaster CG12753-P... 31 1.6
AE014296-338|AAF47554.1| 760|Drosophila melanogaster CG18171-PA... 30 3.8
AY089629-1|AAL90367.1| 229|Drosophila melanogaster RE41295p pro... 29 5.0
AE013599-3313|AAF46788.1| 404|Drosophila melanogaster CG13500-P... 29 5.0
X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of ... 29 8.7
BT021939-1|AAX51644.1| 715|Drosophila melanogaster RE27718p pro... 29 8.7
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 29 8.7
AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA... 29 8.7
>AY051646-1|AAK93070.1| 235|Drosophila melanogaster GM14348p
protein.
Length = 235
Score = 31.5 bits (68), Expect = 1.2
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 236 EVCVLA*NENMSFNDGVVKAQTDPFALKRGGHNVQKWTSYALFKLFKEFRINKNYSKLID 415
E C +A N+ ++ND V++A + P R +QKW F + RI L++
Sbjct: 112 EDCHIAWND--AYNDIVLQASSKPLKKSRMQELLQKWIQMGYFMEVTD-RIYLGPRSLVE 168
Query: 416 ---FLTENFPNNVKNKT 457
+L+ N +N+KN T
Sbjct: 169 LSFYLSSNHADNIKNCT 185
>AE014134-1137|AAF52422.1| 235|Drosophila melanogaster CG11329-PA
protein.
Length = 235
Score = 31.5 bits (68), Expect = 1.2
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 236 EVCVLA*NENMSFNDGVVKAQTDPFALKRGGHNVQKWTSYALFKLFKEFRINKNYSKLID 415
E C +A N+ ++ND V++A + P R +QKW F + RI L++
Sbjct: 112 EDCHIAWND--AYNDIVLQASSKPLKKSRMQELLQKWIQMGYFMEVTD-RIYLGPRSLVE 168
Query: 416 ---FLTENFPNNVKNKT 457
+L+ N +N+KN T
Sbjct: 169 LSFYLSSNHADNIKNCT 185
>BT021249-1|AAX33397.1| 998|Drosophila melanogaster RE60631p
protein.
Length = 998
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +2
Query: 392 KNYSKLIDFLTENFPNNVKNKTFNFSSTGHLFHSLHAYVPSVSDLVKERKQIRLQTEYLA 571
+N + L L+ N N++ F+FS + + Y+ + L ++L T +
Sbjct: 110 RNETSLYYLLSNNHVNSIMVHKFDFSDEDVMGY----YILFLKTL-----SLKLNTHTIH 160
Query: 572 KLFNNTINDFKLYTELYEFIERTEGV 649
+N NDF LYTE +F E +
Sbjct: 161 FFYNEHTNDFPLYTEAIKFFNHPESM 186
>AE014297-2206|AAF55313.2| 1067|Drosophila melanogaster CG12753-PA,
isoform A protein.
Length = 1067
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +2
Query: 392 KNYSKLIDFLTENFPNNVKNKTFNFSSTGHLFHSLHAYVPSVSDLVKERKQIRLQTEYLA 571
+N + L L+ N N++ F+FS + + Y+ + L ++L T +
Sbjct: 110 RNETSLYYLLSNNHVNSIMVHKFDFSDEDVMGY----YILFLKTL-----SLKLNTHTIH 160
Query: 572 KLFNNTINDFKLYTELYEFIERTEGV 649
+N NDF LYTE +F E +
Sbjct: 161 FFYNEHTNDFPLYTEAIKFFNHPESM 186
>AE014297-2205|ABC66179.1| 998|Drosophila melanogaster CG12753-PB,
isoform B protein.
Length = 998
Score = 31.1 bits (67), Expect = 1.6
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +2
Query: 392 KNYSKLIDFLTENFPNNVKNKTFNFSSTGHLFHSLHAYVPSVSDLVKERKQIRLQTEYLA 571
+N + L L+ N N++ F+FS + + Y+ + L ++L T +
Sbjct: 110 RNETSLYYLLSNNHVNSIMVHKFDFSDEDVMGY----YILFLKTL-----SLKLNTHTIH 160
Query: 572 KLFNNTINDFKLYTELYEFIERTEGV 649
+N NDF LYTE +F E +
Sbjct: 161 FFYNEHTNDFPLYTEAIKFFNHPESM 186
>AE014296-338|AAF47554.1| 760|Drosophila melanogaster CG18171-PA
protein.
Length = 760
Score = 29.9 bits (64), Expect = 3.8
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 428 NFPNNVK-NKTFNFSSTGHLFHSLHAYVPSVSDLVK-ERKQIRLQTEYLAKLFNNTINDF 601
+F N V N F + G +H + S+ D+V+ R + LQ + +L N+ +N F
Sbjct: 375 HFVNLVSLNLEFLGPALGRKYHKRNVLF-SIKDMVRLARGLVALQQLQIFRLRNSRLNSF 433
Query: 602 KLYT 613
KLYT
Sbjct: 434 KLYT 437
>AY089629-1|AAL90367.1| 229|Drosophila melanogaster RE41295p
protein.
Length = 229
Score = 29.5 bits (63), Expect = 5.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 507 CPASAIW*RSANKFDCRQNIWQSCS 581
C ASA W RS+ K +++IW C+
Sbjct: 205 CAASATWPRSSQKSSSKRSIWIRCA 229
>AE013599-3313|AAF46788.1| 404|Drosophila melanogaster CG13500-PA
protein.
Length = 404
Score = 29.5 bits (63), Expect = 5.0
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -2
Query: 307 WICLRLNDAIIKRHVLVLSEY--ADLKYLGFEKYKFFE 200
W LRL++ I RHVL+L + A YLG + ++ E
Sbjct: 4 WHSLRLSNRYISRHVLLLLRFYLAQFYYLGLMRLRYDE 41
>X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of
variegation protein3-7 protein.
Length = 1169
Score = 28.7 bits (61), Expect = 8.7
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 433 SQQRQKQNVQLFVYRPSVSLVARVRAQRQRFGEGAQT-NSIADRIFGKAVQQHNKRFQTV 609
+++RQ+ N PSVS + V A+RQ G ++ N ++ R G + KR +
Sbjct: 774 NKERQRANAAAAANAPSVSPTSTVDAERQESGMDKESENDMSVRSDGSTAEPLAKRSRRS 833
Query: 610 H*VVRVYRTDR 642
V R+ R R
Sbjct: 834 MEVRRIIRALR 844
>BT021939-1|AAX51644.1| 715|Drosophila melanogaster RE27718p
protein.
Length = 715
Score = 28.7 bits (61), Expect = 8.7
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 433 SQQRQKQNVQLFVYRPSVSLVARVRAQRQRFGEGAQT-NSIADRIFGKAVQQHNKRFQTV 609
+++RQ+ N PSVS + V A+RQ G ++ N ++ R G + KR +
Sbjct: 320 NKERQRANAAAAANAPSVSPTSTVDAERQESGMDKESENDMSVRSDGSTAEPLAKRSRRS 379
Query: 610 H*VVRVYRTDR 642
V R+ R R
Sbjct: 380 MEVRRIIRALR 390
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 28.7 bits (61), Expect = 8.7
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Frame = +2
Query: 329 HNVQKWTSYALFKLFKEFRINKNYSKLIDFLTENFPN-NVKNKTFNFSSTGHLFHSLHAY 505
+ + T+ LF +++ SKL + L N N K N S+ ++F +
Sbjct: 930 NTIHSTTNIRPIDLFNNILCHEDISKLSEKLVRNKQTLNAKQDNINESNFSNIFVKNN-- 987
Query: 506 VPSVSDLVKERKQIRLQTEYLAKLFNNTINDFKLYTELYEFIERTEGVDC 655
V + K+I T+Y L NN N K+Y + + + + DC
Sbjct: 988 --QVGKSNPKYKEISNYTQYGNYLINNKDNKRKIYKDQVKRKYKYQNEDC 1035
>AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA
protein.
Length = 1250
Score = 28.7 bits (61), Expect = 8.7
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 433 SQQRQKQNVQLFVYRPSVSLVARVRAQRQRFGEGAQT-NSIADRIFGKAVQQHNKRFQTV 609
+++RQ+ N PSVS + V A+RQ G ++ N ++ R G + KR +
Sbjct: 855 NKERQRANAAAAANAPSVSPTSTVDAERQESGMDKESENDMSVRSDGSTAEPLAKRSRRS 914
Query: 610 H*VVRVYRTDR 642
V R+ R R
Sbjct: 915 MEVRRIIRALR 925
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,238,771
Number of Sequences: 53049
Number of extensions: 698650
Number of successful extensions: 2115
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2105
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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