Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24f15
         (508 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    27   0.36 
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    24   3.4  
AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding pr...    24   3.4  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   5.9  

>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 27.1 bits (57), Expect = 0.36
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 306 CWRWVSSLYFYVIL 347
           CWRW++ L  +VIL
Sbjct: 539 CWRWITPLLMFVIL 552


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
 Frame = +1

Query: 292 IKCVVVGDG*V--RCISTSFS 348
           IKCVVVGDG V   C+  S++
Sbjct: 7   IKCVVVGDGTVGKTCMLISYT 27


>AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding
           protein protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +3

Query: 285 AGNQVCCCWRW--VSSLYFYVILDF 353
           A ++ CC WRW  +  L  ++ + F
Sbjct: 2   AASRSCCWWRWDFILGLVAFIFIPF 26


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = +3

Query: 258 DKDWIKSKNAGNQVCCCWRWVSSLYFYVILD 350
           D DW  S  AGN     W WVSS  F  +LD
Sbjct: 407 DADW--SVCAGN-----WMWVSSSAFERLLD 430


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,176
Number of Sequences: 2352
Number of extensions: 8725
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)