Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24f15
         (508 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    23   1.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   3.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   3.2  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              22   4.2  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   7.3  

>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 497 DTYILSI*QWQGDNNYNIHVY 435
           + YI +I  +  DNNYN  +Y
Sbjct: 87  NNYISNISNYNNDNNYNKKLY 107


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 121 CYLNTVPFVSKTTSVDC 171
           CYLNT   ++  T+V C
Sbjct: 564 CYLNTFLLLATPTTVTC 580


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 121 CYLNTVPFVSKTTSVDC 171
           CYLNT   ++  T+V C
Sbjct: 654 CYLNTFLLLATPTTVTC 670


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 315 WVSSLYFYVILDFVM 359
           W+ SLY+Y+IL   +
Sbjct: 7   WLVSLYWYLILQIAL 21


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 130 NTVPFVSKTTSVDCDADV 183
           N +  + +T S DCD DV
Sbjct: 119 NLLEDIYETLSYDCDVDV 136


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,620
Number of Sequences: 438
Number of extensions: 2505
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)