Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24f07
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745205-1|AAU93472.1|   91|Anopheles gambiae cytochrome P450 pr...    28   0.33 
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        27   0.43 
AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.      27   0.43 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   3.0  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   5.3  

>AY745205-1|AAU93472.1|   91|Anopheles gambiae cytochrome P450
           protein.
          Length = 91

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +1

Query: 520 PCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 675
           P +DYV   TRH++ +  V+ I +   +  D      P++  PD  L  E K
Sbjct: 10  PSSDYVIPGTRHIVPKDTVVQIPI-YAIQRDPDHYPDPERFDPDRFLPEEVK 60


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 303 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 407
           GG   P RYRPG ++  +  R  + T  L+   PF
Sbjct: 32  GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 66


>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 303 GGYSWPLRYRPGRISKIQAYRRSRCTSCLLWCSPF 407
           GG   P RYRPG ++  +  R  + T  L+   PF
Sbjct: 34  GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 451 QIQQLHNHGHQIP**NGEHHSKH 383
           Q QQ H H HQ     G+HH++H
Sbjct: 642 QQQQQHQH-HQAHQHQGQHHAQH 663


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 4   FFFSAPVAIMAVNNISKKRKFVGDGVFK 87
           FF + P A+ A ++ S+  KF+G+  F+
Sbjct: 410 FFVNFPRALFARHSSSRLAKFIGEQEFE 437


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,788
Number of Sequences: 2352
Number of extensions: 16867
Number of successful extensions: 39
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)