Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24f04
(452 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC129990-1|AAI29991.1| 695|Homo sapiens nuclear fragile X menta... 33 0.46
BC108307-1|AAI08308.1| 695|Homo sapiens nuclear fragile X menta... 33 0.46
AY232289-1|AAP69984.1| 695|Homo sapiens proliferation-inducing ... 33 0.46
AJ493465-1|CAD38278.1| 695|Homo sapiens FMRP interacting protei... 33 0.46
AB037742-1|BAA92559.1| 714|Homo sapiens KIAA1321 protein protein. 33 0.46
AK126104-1|BAC86442.1| 988|Homo sapiens protein ( Homo sapiens ... 30 3.2
BC113841-1|AAI13842.1| 678|Homo sapiens EPB41 protein protein. 30 4.3
BC024314-1|AAH24314.1| 814|Homo sapiens actin filament associat... 30 4.3
AL355302-1|CAI14968.1| 814|Homo sapiens actin filament associat... 30 4.3
AL133384-1|CAI40128.1| 814|Homo sapiens actin filament associat... 30 4.3
AK126089-1|BAC86432.1| 968|Homo sapiens protein ( Homo sapiens ... 29 5.6
BC069239-1|AAH69239.1| 1190|Homo sapiens KIAA1429 protein protein. 29 7.4
BC003701-1|AAH03701.2| 1198|Homo sapiens KIAA1429 protein protein. 29 7.4
AK097433-1|BAC05051.1| 691|Homo sapiens protein ( Homo sapiens ... 29 7.4
AK000668-1|BAA91316.1| 719|Homo sapiens protein ( Homo sapiens ... 29 7.4
AJ311392-1|CAC60255.1| 691|Homo sapiens putative nuclear protei... 29 7.4
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 29 7.4
AB037850-1|BAA92667.1| 1795|Homo sapiens KIAA1429 protein protein. 29 7.4
AY442317-1|AAR14297.1| 1379|Homo sapiens attractin-like protein ... 29 9.8
AL512304-1|CAH74015.2| 1379|Homo sapiens attractin-like 1 protein. 29 9.8
AL392087-1|CAI40794.2| 1379|Homo sapiens attractin-like 1 protein. 29 9.8
AL357059-1|CAH70625.2| 1379|Homo sapiens attractin-like 1 protein. 29 9.8
AL356100-1|CAI40417.2| 1379|Homo sapiens attractin-like 1 protein. 29 9.8
AL355530-1|CAI13483.2| 1379|Homo sapiens attractin-like 1 protein. 29 9.8
AK127277-1|BAC86914.1| 1233|Homo sapiens protein ( Homo sapiens ... 29 9.8
AB011106-1|BAA25460.2| 1028|Homo sapiens KIAA0534 protein protein. 29 9.8
>BC129990-1|AAI29991.1| 695|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 2 protein.
Length = 695
Score = 33.1 bits (72), Expect = 0.46
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +3
Query: 96 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 269
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234
Query: 270 ETLNIESDIIKTEQTDAP 323
E LNI D I ++T P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252
>BC108307-1|AAI08308.1| 695|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 2 protein.
Length = 695
Score = 33.1 bits (72), Expect = 0.46
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +3
Query: 96 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 269
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234
Query: 270 ETLNIESDIIKTEQTDAP 323
E LNI D I ++T P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252
>AY232289-1|AAP69984.1| 695|Homo sapiens proliferation-inducing
gene 1 protein.
Length = 695
Score = 33.1 bits (72), Expect = 0.46
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +3
Query: 96 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 269
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234
Query: 270 ETLNIESDIIKTEQTDAP 323
E LNI D I ++T P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252
>AJ493465-1|CAD38278.1| 695|Homo sapiens FMRP interacting protein,
82kD protein.
Length = 695
Score = 33.1 bits (72), Expect = 0.46
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +3
Query: 96 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 269
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234
Query: 270 ETLNIESDIIKTEQTDAP 323
E LNI D I ++T P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252
>AB037742-1|BAA92559.1| 714|Homo sapiens KIAA1321 protein protein.
Length = 714
Score = 33.1 bits (72), Expect = 0.46
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +3
Query: 96 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 269
N + K+D IP N N N + D+D + TTP+++ N+ K
Sbjct: 194 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 253
Query: 270 ETLNIESDIIKTEQTDAP 323
E LNI D I ++T P
Sbjct: 254 ENLNIVQDKIMQQETSVP 271
>AK126104-1|BAC86442.1| 988|Homo sapiens protein ( Homo sapiens
cDNA FLJ44116 fis, clone TESTI4046884. ).
Length = 988
Score = 30.3 bits (65), Expect = 3.2
Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +3
Query: 9 IKMKI-NLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEE- 182
+KM I NL +IQ Q L+N L + + S+K +++ I + + +N+ LR++S +
Sbjct: 304 VKMPIENLSSIQ-QKLLNKKRLPKLQPLKMFSDKSESNTINFKENIQNILLRVHSFHSQL 362
Query: 183 CTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 308
T N D+ + D+ ++ ++P ++ +I+ +E
Sbjct: 363 LTYAVNIISDMLAVIKNKLDNEISQMEPSSISILKENIVASE 404
>BC113841-1|AAI13842.1| 678|Homo sapiens EPB41 protein protein.
Length = 678
Score = 29.9 bits (64), Expect = 4.3
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +3
Query: 198 NFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDAPATSGD 338
NF +P P + D ++ PF TLNI I E TD SGD
Sbjct: 548 NFMESVPEPRPSEWDKRLSTHSPFRTLNINGQIPTGEGTD--DNSGD 592
>BC024314-1|AAH24314.1| 814|Homo sapiens actin filament associated
protein 1-like 2 protein.
Length = 814
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +3
Query: 159 RLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDA--PATS 332
+L + EEC +++ +DL L+ E KD+ A TL D E A PA++
Sbjct: 715 KLKEIDEECRGEESRRVDLELSIMEVKDNLKKAEAGPVTLGTTVDTTHLENPKAVTPASA 774
Query: 333 GD 338
D
Sbjct: 775 PD 776
>AL355302-1|CAI14968.1| 814|Homo sapiens actin filament associated
protein 1-like 2 protein.
Length = 814
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +3
Query: 159 RLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDA--PATS 332
+L + EEC +++ +DL L+ E KD+ A TL D E A PA++
Sbjct: 715 KLKEIDEECRGEESRRVDLELSIMEVKDNLKKAEAGPVTLGTTVDTTHLENPKAVTPASA 774
Query: 333 GD 338
D
Sbjct: 775 PD 776
>AL133384-1|CAI40128.1| 814|Homo sapiens actin filament associated
protein 1-like 2 protein.
Length = 814
Score = 29.9 bits (64), Expect = 4.3
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +3
Query: 159 RLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTEQTDA--PATS 332
+L + EEC +++ +DL L+ E KD+ A TL D E A PA++
Sbjct: 715 KLKEIDEECRGEESRRVDLELSIMEVKDNLKKAEAGPVTLGTTVDTTHLENPKAVTPASA 774
Query: 333 GD 338
D
Sbjct: 775 PD 776
>AK126089-1|BAC86432.1| 968|Homo sapiens protein ( Homo sapiens
cDNA FLJ44101 fis, clone TESTI4043947. ).
Length = 968
Score = 29.5 bits (63), Expect = 5.6
Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +3
Query: 9 IKMKI-NLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEE- 182
+KM I NL +IQ Q L+N L + + S+K +++ I + + +N+ LR++S +
Sbjct: 522 VKMPIENLSSIQ-QKLLNKKMLPKLQPLKMFSDKSESNTINFKENIQNILLRVHSFHSQL 580
Query: 183 CTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 308
T N D+ + D+ ++ ++P ++ +I+ +E
Sbjct: 581 LTYAVNIISDMLAVIKNKLDNEISQMEPSSISILKENIVASE 622
>BC069239-1|AAH69239.1| 1190|Homo sapiens KIAA1429 protein protein.
Length = 1190
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 51 LINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNS-VPEECTDDDN 200
L+ + + MS+N+ ++K L E P+N+ L L V E DDDN
Sbjct: 797 LMEVEGAHTSRTMSINAAELKQLLQSKEESPENLFLELEKLVLEHSKDDDN 847
>BC003701-1|AAH03701.2| 1198|Homo sapiens KIAA1429 protein protein.
Length = 1198
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 51 LINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNS-VPEECTDDDN 200
L+ + + MS+N+ ++K L E P+N+ L L V E DDDN
Sbjct: 805 LMEVEGAHTSRTMSINAAELKQLLQSKEESPENLFLELEKLVLEHSKDDDN 855
>AK097433-1|BAC05051.1| 691|Homo sapiens protein ( Homo sapiens
cDNA FLJ40114 fis, clone TESTI2008762. ).
Length = 691
Score = 29.1 bits (62), Expect = 7.4
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +3
Query: 126 PDENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDI--I 299
PD+N + NS E DD++ D+P + D N+ + + +SD+
Sbjct: 159 PDDNSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDSSD-DNSDDSSDDNSDDSDVPDD 217
Query: 300 KTEQTDAPATSGDDNN 347
K++ +D P S DD++
Sbjct: 218 KSDDSDVPDDSSDDSD 233
>AK000668-1|BAA91316.1| 719|Homo sapiens protein ( Homo sapiens
cDNA FLJ20661 fis, clone KAIA871. ).
Length = 719
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 51 LINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNS-VPEECTDDDN 200
L+ + + MS+N+ ++K L E P+N+ L L V E DDDN
Sbjct: 326 LMEVEGAHTSRTMSINAAELKQLLQSKEESPENLFLELEKLVLEHSKDDDN 376
>AJ311392-1|CAC60255.1| 691|Homo sapiens putative nuclear protein
protein.
Length = 691
Score = 29.1 bits (62), Expect = 7.4
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +3
Query: 126 PDENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDI--I 299
PD+N + NS E DD++ D+P + D N+ + + +SD+
Sbjct: 159 PDDNSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDSSD-DNSDDSSDDNSDDSDVPDD 217
Query: 300 KTEQTDAPATSGDDNN 347
K++ +D P S DD++
Sbjct: 218 KSDDSDVPDDSSDDSD 233
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 29.1 bits (62), Expect = 7.4
Identities = 25/104 (24%), Positives = 45/104 (43%)
Frame = -2
Query: 412 FDLSFKPSTVYSSSFASTTFRLLLSSPLVAGASVCSVLIISDSIFKVSKGLMAFIKSSFC 233
F L P+T S +ST + SSPL + + S L + + S + ++
Sbjct: 7974 FSLMSSPATTSPSPVSSTLPESISSSPLPVTSLLTSGLAKTTDMLHKSSEPVTNSPANLS 8033
Query: 232 SGVVNGKSIEKLSSSVHSSGTLFRRNVTFLGSFSSGIKSALILL 101
S V + ++++ + R VT +G+ SSG +S +L
Sbjct: 8034 STSVEILATSEVTTDTEKTHPSSNRTVTDVGTSSSGHESTSFVL 8077
>AB037850-1|BAA92667.1| 1795|Homo sapiens KIAA1429 protein protein.
Length = 1795
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 51 LINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNS-VPEECTDDDN 200
L+ + + MS+N+ ++K L E P+N+ L L V E DDDN
Sbjct: 1417 LMEVEGAHTSRTMSINAAELKQLLQSKEESPENLFLELEKLVLEHSKDDDN 1467
>AY442317-1|AAR14297.1| 1379|Homo sapiens attractin-like protein
protein.
Length = 1379
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 207 SRSCRRPCTLRARCSDVT 154
+R C++PC+LR CS+ T
Sbjct: 883 ARPCKKPCSLRTSCSNCT 900
>AL512304-1|CAH74015.2| 1379|Homo sapiens attractin-like 1 protein.
Length = 1379
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 207 SRSCRRPCTLRARCSDVT 154
+R C++PC+LR CS+ T
Sbjct: 883 ARPCKKPCSLRTSCSNCT 900
>AL392087-1|CAI40794.2| 1379|Homo sapiens attractin-like 1 protein.
Length = 1379
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 207 SRSCRRPCTLRARCSDVT 154
+R C++PC+LR CS+ T
Sbjct: 883 ARPCKKPCSLRTSCSNCT 900
>AL357059-1|CAH70625.2| 1379|Homo sapiens attractin-like 1 protein.
Length = 1379
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 207 SRSCRRPCTLRARCSDVT 154
+R C++PC+LR CS+ T
Sbjct: 883 ARPCKKPCSLRTSCSNCT 900
>AL356100-1|CAI40417.2| 1379|Homo sapiens attractin-like 1 protein.
Length = 1379
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 207 SRSCRRPCTLRARCSDVT 154
+R C++PC+LR CS+ T
Sbjct: 883 ARPCKKPCSLRTSCSNCT 900
>AL355530-1|CAI13483.2| 1379|Homo sapiens attractin-like 1 protein.
Length = 1379
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 207 SRSCRRPCTLRARCSDVT 154
+R C++PC+LR CS+ T
Sbjct: 883 ARPCKKPCSLRTSCSNCT 900
>AK127277-1|BAC86914.1| 1233|Homo sapiens protein ( Homo sapiens
cDNA FLJ45344 fis, clone BRHIP3010289, moderately
similar to Attractin precursor. ).
Length = 1233
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 207 SRSCRRPCTLRARCSDVT 154
+R C++PC+LR CS+ T
Sbjct: 737 ARPCKKPCSLRTSCSNCT 754
>AB011106-1|BAA25460.2| 1028|Homo sapiens KIAA0534 protein protein.
Length = 1028
Score = 28.7 bits (61), Expect = 9.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 207 SRSCRRPCTLRARCSDVT 154
+R C++PC+LR CS+ T
Sbjct: 532 ARPCKKPCSLRTSCSNCT 549
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,210,760
Number of Sequences: 237096
Number of extensions: 1041712
Number of successful extensions: 11776
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 11592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11776
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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