Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24e23
         (729 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   4.2  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   7.3  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.7  

>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +1

Query: 346 RRNAFLLSNVSSRYNDSTLN*IEVKRLVGGS 438
           R  A LL    SR  DSTL   EV+ ++GGS
Sbjct: 266 RTRADLLRIELSRSADSTLVLQEVQEIIGGS 296


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 666 LIQWRCTQRFLVNFGYSWLIF 728
           L+Q+ C   F+ NFG +++++
Sbjct: 357 LVQYYCYLFFITNFGINFILY 377


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 268 VCNYTFRSDRNF 303
           VCNY  R+DR F
Sbjct: 867 VCNYASRNDRTF 878


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,045
Number of Sequences: 2352
Number of extensions: 13884
Number of successful extensions: 103
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)