Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24e14
(409 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0108 - 12628711-12629178 31 0.35
05_04_0343 - 20437780-20438009,20438576-20438666 31 0.47
01_05_0769 - 25042022-25042447,25042856-25043234,25043714-250437... 30 0.62
04_04_0111 - 22842337-22842648,22843008-22843402,22843732-228440... 29 1.4
08_02_0604 - 19215017-19215101,19215870-19216021,19216591-192166... 29 1.9
06_01_1110 - 9137529-9137918,9138011-9138112,9138289-9138381,913... 29 1.9
05_01_0438 + 3475017-3475484 29 1.9
03_06_0601 + 34991912-34992352,34993719-34994516 29 1.9
01_06_0231 + 27727110-27727206,27727315-27727447,27727491-277275... 29 1.9
11_04_0468 + 18059024-18059108,18059161-18059253,18059408-180596... 28 2.5
07_01_0266 + 1977961-1978120,1979547-1979680,1979813-1979911,198... 28 2.5
02_05_0979 + 33268294-33269595 28 2.5
02_04_0385 + 22514619-22514703,22514756-22514848,22515003-225152... 28 2.5
01_03_0175 + 13450869-13451013,13451293-13451372,13451417-134522... 28 2.5
08_02_0484 + 17665714-17666877 28 3.3
06_01_0947 - 7303828-7304172,7304806-7304898,7304984-7305196,730... 28 3.3
12_02_1179 - 26720533-26721021,26721329-26722597 27 4.3
04_04_0475 + 25500470-25500609,25500697-25500794,25502806-255029... 27 4.3
03_05_0348 - 23346182-23348022,23348118-23348148 27 5.7
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 27 5.7
07_01_0105 - 798883-798942,799118-799186,799282-799345,799434-79... 27 7.6
03_06_0454 + 34044351-34044499,34045495-34045510,34045640-340458... 27 7.6
03_06_0052 - 31295839-31295883,31296312-31296380,31296458-312965... 27 7.6
>01_03_0108 - 12628711-12629178
Length = 155
Score = 31.1 bits (67), Expect = 0.35
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 371 KHKRVHVSIILRTKLFFRCTMFYYLRRFAP*APCGGGTFLSFH 243
KHK+V ++++ K+ LR+ P A CG GTF++ H
Sbjct: 94 KHKKVKLAVLQFYKVDDATGKVTRLRKECPNAECGAGTFMANH 136
>05_04_0343 - 20437780-20438009,20438576-20438666
Length = 106
Score = 30.7 bits (66), Expect = 0.47
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 145 KNSNSQGSNTSAANAIALGAMAVVAVGTFLFTWWKERKVPPPH 273
K + S+G + LG AVV + FLF +W+++K H
Sbjct: 43 KKAQSKGHTGRTVLIVLLGIGAVVLLSFFLFKYWQKKKREEQH 85
>01_05_0769 -
25042022-25042447,25042856-25043234,25043714-25043763,
25044222-25044442,25045085-25045385
Length = 458
Score = 30.3 bits (65), Expect = 0.62
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 175 SAANAIALGAMAVVAVGTFLFTWWKERKVPPPHGAQGANRRR 300
+AA A A+ A+ +AV T + WW R++ AQG R
Sbjct: 14 AAAAAAAVAALLWLAVSTLEWAWWTPRRLERALRAQGIRGNR 55
>04_04_0111 -
22842337-22842648,22843008-22843402,22843732-22844073,
22844154-22844282,22844402-22844514,22844596-22844667,
22844783-22844859,22844978-22845052,22845058-22845121,
22845332-22845403,22845496-22845628,22846859-22846961
Length = 628
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +1
Query: 157 SQG-SNTSA-ANAIALGAMAVVAVGTFLFTWWKERKVPPPH 273
SQG S T A A +A A + AV F WW+ RK P H
Sbjct: 235 SQGDSKTGAIAGGVAAAAALLFAVPAIGFAWWRRRK-PEEH 274
>08_02_0604 -
19215017-19215101,19215870-19216021,19216591-19216614,
19216656-19216884,19217061-19217177,19219249-19219311,
19219887-19220125
Length = 302
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +1
Query: 184 NAIALGAM---AVVAVGTFLFTWWKERKVP 264
N I +G++ A+V VG +LF W K R++P
Sbjct: 269 NDITIGSLLGTALVIVGLYLFLWAKAREIP 298
>06_01_1110 -
9137529-9137918,9138011-9138112,9138289-9138381,
9138465-9138719,9139002-9139258,9139341-9139445,
9139555-9139834,9139932-9140212,9140362-9140482
Length = 627
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 360 CTRKYYFANKII--FPLHYVLLSSPIRALSSVRW 265
C +++ K +PLH VL +SP+ +S ++W
Sbjct: 387 CQQRHKLKKKYFDPYPLHLVLKTSPVTCMSDLQW 420
>05_01_0438 + 3475017-3475484
Length = 155
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 371 KHKRVHVSIILRTKLFFRCTMFYYLRRFAP*APCGGGTFLSFH 243
KHK+V ++++ K+ LR+ P CG GTF++ H
Sbjct: 94 KHKKVKLAVLQFYKVDDATGKVTRLRKECPNNDCGAGTFMANH 136
>03_06_0601 + 34991912-34992352,34993719-34994516
Length = 412
Score = 28.7 bits (61), Expect = 1.9
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +1
Query: 157 SQGSNTSAANAIALGAMAVVAVGTFLFTWWKERKVPPPHGAQGANRRR 300
S + +AA A A G A A T TWW E P A A+RRR
Sbjct: 274 SDHHHPNAAAASAAGTAA--AADTAAQTWWSEYWARHPEMAAAASRRR 319
>01_06_0231 +
27727110-27727206,27727315-27727447,27727491-27727553,
27729069-27729140,27729640-27729783,27729868-27729990,
27730102-27730157,27730249-27730635,27731176-27731366,
27731498-27731630,27731715-27731869,27732188-27732379,
27732490-27732750
Length = 668
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 175 SAANAIALGAMAVVAVGTFLFTWWKERKVPPP 270
++ANA +V + GT F+ +KE KVPPP
Sbjct: 259 ASANAPVPAVASVPSTGTGSFSAFKEIKVPPP 290
>11_04_0468 +
18059024-18059108,18059161-18059253,18059408-18059661,
18059783-18059995,18060081-18060173,18060617-18060721,
18060806-18061150
Length = 395
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -2
Query: 324 FPLHYVLLSSPIRALSSVRWGNL--PFFPPSKEKCSDRHNRHR 202
FPLH V +SP++ +S+ +W L + P K + ++ +R
Sbjct: 183 FPLHLVTKTSPVKFMSNEQWTQLLESWKSPQKMEMCQKNKENR 225
>07_01_0266 +
1977961-1978120,1979547-1979680,1979813-1979911,
1980257-1980414,1981930-1982018,1982678-1982769,
1983658-1983706,1983953-1983966
Length = 264
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 106 NDNDCDGTLCTVQIENETKLACRFT 32
+DN C G L T N +K+ C FT
Sbjct: 239 DDNTCQGELVTEYTNNGSKITCGFT 263
>02_05_0979 + 33268294-33269595
Length = 433
Score = 28.3 bits (60), Expect = 2.5
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = -2
Query: 270 RWGNLPFFPPSKEKCSDRHNRHRA*CYSISSGCVAALRIRILGHRKMAIYLWQRKTTMIV 91
+W +L PP +E + RH H S C + ++I GH YLW T I+
Sbjct: 94 QWQHLIPRPPVEEIMTARHLPHGTIFPLASKSCHGLVLLKITGHH--THYLWNPSTRHIL 151
>02_04_0385 +
22514619-22514703,22514756-22514848,22515003-22515256,
22515378-22515590,22515676-22515768,22516213-22516317,
22516402-22516710,22517648-22517717,22518008-22518102,
22519143-22519361
Length = 511
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -2
Query: 324 FPLHYVLLSSPIRALSSVRWGNL--PFFPPSKEKCSDRHNRHR 202
FPLH V +SP++ +S+ +W L + P K + ++ +R
Sbjct: 183 FPLHLVTKTSPVKFMSNEQWTQLLESWKSPQKMEMCQKNKENR 225
>01_03_0175 +
13450869-13451013,13451293-13451372,13451417-13452240,
13452287-13452638
Length = 466
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 212 LWRSEHFSLLGGKKGRFPHRTELKARIGEDS 304
LW EHF L G + PHR + IG DS
Sbjct: 67 LWSIEHFGLRTGLRRPLPHRHLRVSDIGIDS 97
>08_02_0484 + 17665714-17666877
Length = 387
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 190 IALGAMAVVAVGTFLFTWWKERKVPPPHGAQG 285
+A+ A AVVA+ LF W+ ++V G G
Sbjct: 14 VAVAAAAVVALAVALFLLWRNKRVARAGGGAG 45
>06_01_0947 -
7303828-7304172,7304806-7304898,7304984-7305196,
7305318-7305409,7305726-7305818,7305871-7305955
Length = 306
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 324 FPLHYVLLSSPIRALSSVRWGNL 256
FPLH V +SP++ +S+ +W L
Sbjct: 129 FPLHLVTKTSPVKFMSNEQWTQL 151
>12_02_1179 - 26720533-26721021,26721329-26722597
Length = 585
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = +1
Query: 115 PQINCHFAMTKNSNSQGSNTSAANAIALGAMAVVAVGTFLFTWWKERKVP 264
P C K + + N + ++ + VVA+ F WWK+ K P
Sbjct: 531 PCQECQAVNEKKTGGKKRNANRSHYPVFLFVFVVAIIALFFPWWKDYKEP 580
>04_04_0475 +
25500470-25500609,25500697-25500794,25502806-25502915,
25502998-25503293,25503399-25503474,25503577-25503688,
25503955-25504004,25504090-25504392,25504446-25504547,
25505463-25505635,25505745-25505917,25505997-25506106,
25506180-25506329,25506726-25506881,25507000-25507116,
25507277-25507474,25507809-25507952
Length = 835
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +1
Query: 133 FAMTKNSNSQGSNTSAANAIALGAMAVVAVGTFLFTWW 246
+ + +N + + A ++ +A+ A G FLF WW
Sbjct: 55 YLLKRNLQATAKSFMAEGKVSADPVAIDAPGGFLFEWW 92
>03_05_0348 - 23346182-23348022,23348118-23348148
Length = 623
Score = 27.1 bits (57), Expect = 5.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 106 FSLPQINCHFAMTKNSNSQGSNTSAANAIALGAMAVVA 219
FSL Q + A+ + ++ T+ +AIALG VVA
Sbjct: 161 FSLAQPRAYVALNDPAAAEADITALVDAIALGLFCVVA 198
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 133 FAMTKNSNSQGSNTSAANAIALGAMAVVAVGTFLFTWW 246
+ M +N + A ++ +A+ A G FLF WW
Sbjct: 28 YFMKRNLQATAKAFQAEGKVSSDPVAIDAPGGFLFEWW 65
>07_01_0105 -
798883-798942,799118-799186,799282-799345,799434-799516,
799957-800022,800143-800233,800622-800779,801144-801338,
801499-801628,803016-803168,803877-803962
Length = 384
Score = 26.6 bits (56), Expect = 7.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 315 HYVLLSSPIRALSSVRWGNLPFFPPSKE 232
H V++ +R L + WG F+ P KE
Sbjct: 206 HNVMIDHELRKLRLIDWGLAEFYHPGKE 233
>03_06_0454 + 34044351-34044499,34045495-34045510,34045640-34045862,
34045969-34046092,34046168-34046294,34046821-34046882,
34046972-34048023,34048167-34048556,34048667-34052628,
34052710-34052796,34052885-34053004,34053096-34053152
Length = 2122
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +1
Query: 73 PCKVFHHNHCRFSLPQINCHFAMTKNSN---SQGSNTSAANAI 192
PCK + + LPQ++C + + S+ S S+ANA+
Sbjct: 1569 PCKQLESENGSYCLPQVDCQIEPCYSESVVLSEASTMSSANAM 1611
>03_06_0052 -
31295839-31295883,31296312-31296380,31296458-31296521,
31296598-31296680,31297243-31297308,31297426-31297516,
31298090-31298247,31298432-31298476,31299189-31299318,
31300685-31300935
Length = 333
Score = 26.6 bits (56), Expect = 7.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 315 HYVLLSSPIRALSSVRWGNLPFFPPSKE 232
H V++ +R L + WG F+ P KE
Sbjct: 160 HNVMIDHELRKLRLIDWGLAEFYHPGKE 187
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,641,266
Number of Sequences: 37544
Number of extensions: 234653
Number of successful extensions: 631
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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