Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24e14
(409 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ431212-1|CAD24050.1| 77|Homo sapiens truncated steroid 21-hy... 29 4.6
AB040955-1|BAA96046.1| 1044|Homo sapiens KIAA1522 protein protein. 29 4.6
U54559-1|AAD03465.1| 352|Homo sapiens translation initiation fa... 29 6.0
CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein. 29 6.0
BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation ... 29 6.0
BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein. 29 6.0
BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation ... 29 6.0
AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation ... 29 6.0
AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation ... 29 6.0
>AJ431212-1|CAD24050.1| 77|Homo sapiens truncated steroid
21-hydroxylase protein.
Length = 77
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 190 IALGAMAVVAVGTFLFTWWKERKVPPPHGAQG 285
+ L + ++A L+ WWK R +PPP G
Sbjct: 4 LGLLLLPLLAGARLLWNWWKLRSLPPPASCPG 35
>AB040955-1|BAA96046.1| 1044|Homo sapiens KIAA1522 protein protein.
Length = 1044
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 307 STIFADSRLELRAVGEPSFLSTK*REMFRPPQPPSR 200
ST A L +R+ G+ S S R++ RPP PP R
Sbjct: 418 STAEASDTLSIRSSGQLSGRSVSLRKLKRPPPPPRR 453
>U54559-1|AAD03465.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = -1
Query: 283 LELRAVGEPSFLSTK*REMFRPPQPPSRL--VL*H*QRMCCCPAN*NSWSSQN-GNLFVA 113
++ ++ GEP ++F+PPQPP+R+ +L Q C N +++QN G LF+A
Sbjct: 286 MQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344
>CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein.
Length = 352
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = -1
Query: 283 LELRAVGEPSFLSTK*REMFRPPQPPSRL--VL*H*QRMCCCPAN*NSWSSQN-GNLFVA 113
++ ++ GEP ++F+PPQPP+R+ +L Q C N +++QN G LF+A
Sbjct: 286 MQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344
>BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = -1
Query: 283 LELRAVGEPSFLSTK*REMFRPPQPPSRL--VL*H*QRMCCCPAN*NSWSSQN-GNLFVA 113
++ ++ GEP ++F+PPQPP+R+ +L Q C N +++QN G LF+A
Sbjct: 286 MQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344
>BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein.
Length = 349
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = -1
Query: 283 LELRAVGEPSFLSTK*REMFRPPQPPSRL--VL*H*QRMCCCPAN*NSWSSQN-GNLFVA 113
++ ++ GEP ++F+PPQPP+R+ +L Q C N +++QN G LF+A
Sbjct: 283 MQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 341
>BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = -1
Query: 283 LELRAVGEPSFLSTK*REMFRPPQPPSRL--VL*H*QRMCCCPAN*NSWSSQN-GNLFVA 113
++ ++ GEP ++F+PPQPP+R+ +L Q C N +++QN G LF+A
Sbjct: 286 MQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344
>AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = -1
Query: 283 LELRAVGEPSFLSTK*REMFRPPQPPSRL--VL*H*QRMCCCPAN*NSWSSQN-GNLFVA 113
++ ++ GEP ++F+PPQPP+R+ +L Q C N +++QN G LF+A
Sbjct: 286 MQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344
>AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = -1
Query: 283 LELRAVGEPSFLSTK*REMFRPPQPPSRL--VL*H*QRMCCCPAN*NSWSSQN-GNLFVA 113
++ ++ GEP ++F+PPQPP+R+ +L Q C N +++QN G LF+A
Sbjct: 286 MQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,899,502
Number of Sequences: 237096
Number of extensions: 1180434
Number of successful extensions: 2599
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2599
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -