Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24e10
         (557 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   1.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   5.4  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   9.5  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   9.5  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 545 DQYSFLTVNYKIYLKNRNVETYTIMN*SSASQCPYL 438
           D   F+T+N+ + L +  V  Y I+  + A  C  L
Sbjct: 216 DLLVFITINFVVLLGDLYVTLYIILTNNQAKYCTTL 251


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 88  LIFFSIIWVFIILNFMVY 141
           L F  ++W+   LNFM++
Sbjct: 138 LFFVILLWISFFLNFMLH 155


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 109 WVFIILNFMVYILF 150
           W+F + NF+  +LF
Sbjct: 243 WLFFLANFLTNLLF 256


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 161 NYSRRNRARVVNNG 202
           N   RNR + VNNG
Sbjct: 58  NARERNRVKQVNNG 71


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 161 NYSRRNRARVVNNG 202
           N   RNR + VNNG
Sbjct: 91  NARERNRVKQVNNG 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,849
Number of Sequences: 336
Number of extensions: 2543
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)