Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24e10
(557 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.1
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 23 2.1
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 23 2.1
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 4.8
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 4.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 4.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 4.8
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 22 4.8
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/59 (18%), Positives = 30/59 (50%)
Frame = +2
Query: 374 NIQLI*LFFVKLEHYLKYMFDQDTDIAKLMINS*LYMFLHSYFLNIFCSSLSKKNTDHL 550
N+Q++ L K++H +Y F+++ + + ++ ++ F +I L + +H+
Sbjct: 503 NLQILNLARNKVQHVERYAFERNMRLEAIRLDGNFLSDINGVFTSIASLLLLNLSENHI 561
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.1
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +1
Query: 439 RYGHCEADDQFIIV 480
+YG C ADD +++V
Sbjct: 459 KYGVCHADDAYMVV 472
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.1
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +1
Query: 439 RYGHCEADDQFIIV 480
+YG C ADD +++V
Sbjct: 459 KYGVCHADDAYMVV 472
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 309 LTSKQISCENIFNYVNRYNIHTIYN 383
+ S S N +NY N YN + +N
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 309 LTSKQISCENIFNYVNRYNIHTIYN 383
+ S S N +NY N YN + +N
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 309 LTSKQISCENIFNYVNRYNIHTIYN 383
+ S S N +NY N YN + +N
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 309 LTSKQISCENIFNYVNRYNIHTIYN 383
+ S S N +NY N YN + +N
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 309 LTSKQISCENIFNYVNRYNIHTIYN 383
+ S S N +NY N YN + +N
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 309 LTSKQISCENIFNYVNRYNIHTIYN 383
+ S S N +NY N YN + +N
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 309 LTSKQISCENIFNYVNRYNIHTIYN 383
+ S S N +NY N YN + +N
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 309 LTSKQISCENIFNYVNRYNIHTIYN 383
+ S S N +NY N YN + +N
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHN 105
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 309 LTSKQISCENIFNYVNRYNIHTIYN 383
+ S S N +NY N YN + +N
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHN 338
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 4.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 309 LTSKQISCENIFNYVNRYNIHTIYN 383
+ S S N +NY N YN + +N
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHN 338
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.8 bits (44), Expect = 4.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 85 YLIFFSIIWVFIILNFMVYILFKL 156
YLIF S I ++ L MV+ +K+
Sbjct: 206 YLIFSSTISFYLPLFVMVFTYYKI 229
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,231
Number of Sequences: 438
Number of extensions: 2896
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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