Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24e05
         (688 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745230-1|AAU93510.1|   80|Anopheles gambiae glutathione-depend...    85   2e-18
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           27   0.73 
AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    25   3.0  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   3.0  
AF458073-1|AAL68639.1|  166|Anopheles gambiae D7-related 5 prote...    24   3.9  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    24   5.2  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    24   5.2  

>AY745230-1|AAU93510.1|   80|Anopheles gambiae glutathione-dependent
           peroxidase protein.
          Length = 80

 Score = 85.0 bits (201), Expect = 2e-18
 Identities = 36/61 (59%), Positives = 44/61 (72%)
 Frame = +1

Query: 343 FVYVDVGDREYWKDKECPFRTDSRSKLMVIPTLIKWKGVQRLEGSQCSNRELLQMLFEEE 522
           FVYVDVGDR  WKD   PFR D+ + L VIPT+I+WK  QRLEG QC   +LL++ F E+
Sbjct: 20  FVYVDVGDRPTWKDMNNPFRKDTNTHLSVIPTMIRWKQPQRLEGEQCGKADLLELFFSED 79

Query: 523 D 525
           D
Sbjct: 80  D 80


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 399 QNGQSL*VDGHTDFNKMEGSTEA*GKPVQQSGTS 500
           QNG++  V+ +T   +    TE  G PV+QSG +
Sbjct: 173 QNGRTYYVNHYTKTTQWSRPTEPAGPPVRQSGNN 206


>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 268 SWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGDRE 372
           +WC  C    P +  + ++    I+ V VDV + E
Sbjct: 30  TWCGPCKVIAPKLEEFQNKYADKIVVVKVDVDECE 64


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 235  YFSGSKLPDGNSWCPDCVEAEPVVRHYLSELDKS 336
            YF    + +G+  CP+C +A   V H L    +S
Sbjct: 925  YFVEKGILEGSPNCPECGDAVEDVEHVLFHCPRS 958


>AF458073-1|AAL68639.1|  166|Anopheles gambiae D7-related 5 protein
           protein.
          Length = 166

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = -2

Query: 630 ELKYFMVDNIIYSYVIVGNLSIRICLKRIGD 538
           E +YF+V  +I   +IV  L++  C++ + +
Sbjct: 2   EWRYFVVIALICPLIIVETLAVSDCVRHVSE 32


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 219 DHENQLHEYISKILQNLLDPR**PFWEVQYLISLI 115
           D   ++ +YIS  L+N+ D R  P  +  YL  LI
Sbjct: 18  DFAKEMVDYISNYLENIRDRRVLPTVQPGYLRPLI 52


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 219 DHENQLHEYISKILQNLLDPR**PFWEVQYLISLI 115
           D   ++ +YIS  L+N+ D R  P  +  YL  LI
Sbjct: 49  DFAKEMVDYISNYLENIRDRRVLPTVQPGYLRPLI 83


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,264
Number of Sequences: 2352
Number of extensions: 14057
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)