Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24e05
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024860-1|AAK29986.1|  132|Caenorhabditis elegans Hypothetical ...    81   6e-16
AL031632-3|CAA21006.1|  283|Caenorhabditis elegans Hypothetical ...    33   0.19 
U28412-5|AAC46595.1|  229|Caenorhabditis elegans Hypothetical pr...    32   0.33 
Z81038-12|CAB02758.2|  380|Caenorhabditis elegans Hypothetical p...    31   1.0  
AC006633-1|AAK68374.1|  113|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z82059-2|CAB04876.3|  557|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AF068709-5|AAC19250.2|  332|Caenorhabditis elegans Serpentine re...    28   7.2  
AF045642-1|AAZ82857.1|  230|Caenorhabditis elegans Hypothetical ...    27   9.5  

>AC024860-1|AAK29986.1|  132|Caenorhabditis elegans Hypothetical
           protein Y71H2AR.1 protein.
          Length = 132

 Score = 81.4 bits (192), Expect = 6e-16
 Identities = 46/101 (45%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
 Frame = +1

Query: 238 FSGSK-LPDGNSWCPDCVEAEPVVRHYLSELDKS---IIFVYVDVGDREYWKDKECPFRT 405
           F+GSK L  G SWCPDCV AEPVV   + +   +   + FV V VG+RE W+D    FRT
Sbjct: 32  FTGSKILTTGESWCPDCVVAEPVVEEVIKDAAVAGLDVHFVTVFVGNREVWRDPAVGFRT 91

Query: 406 DSRSKLMVIPTLIK-WKGVQRLEGSQCSNRELLQMLFEEED 525
           D   KL  IPTL++     +RL   Q +N+ L++  F EED
Sbjct: 92  DPTLKLTCIPTLLEVGNKAKRLLERQIANKHLVKDFFTEED 132


>AL031632-3|CAA21006.1|  283|Caenorhabditis elegans Hypothetical
           protein Y32B12B.3 protein.
          Length = 283

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 19/63 (30%), Positives = 34/63 (53%)
 Frame = -2

Query: 639 LLEELKYFMVDNIIYSYVIVGNLSIRICLKRIGDFSYLIFFFEQHLQKFPIAALASLKPL 460
           ++    +FM+  II   ++   L + I + R+G   + IF+F+ H +KFPI+ +  L   
Sbjct: 76  VIRNATFFMLWPIIPLGIVRSILMLSINIDRLGALYFPIFYFKYH-RKFPISIIVILTLT 134

Query: 459 YSL 451
           Y L
Sbjct: 135 YIL 137


>U28412-5|AAC46595.1|  229|Caenorhabditis elegans Hypothetical
           protein T19C3.4 protein.
          Length = 229

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = +1

Query: 70  LTVGNLYVFKKYIKIY*TNQVLHFPKWLLTWI*KVLKNFRNILVQLILV--VPLYF 231
           +T G LY   +  K   T     + KW++ WI   + +F   L+ L+L    P YF
Sbjct: 11  ITAGTLYPAYRSYKAVRTKDTREYVKWMMYWIVFAIYSFLENLLDLVLAFWFPFYF 66


>Z81038-12|CAB02758.2|  380|Caenorhabditis elegans Hypothetical
           protein C25A1.3 protein.
          Length = 380

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +1

Query: 274 CPDCVEAEPVVRHYLSELDKSIIFVY 351
           CP+ +   P+V+H L ELD  ++FV+
Sbjct: 228 CPEFLAYFPLVKHLLEELDMELLFVH 253


>AC006633-1|AAK68374.1|  113|Caenorhabditis elegans Hypothetical
           protein F35B3.3 protein.
          Length = 113

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +1

Query: 367 REYWKDKECPFRTDSRSKLMVIPTLIKWKGVQRLEGSQCSNR 492
           R+ +K K  P  TD  S    I     W  +QR+  S C NR
Sbjct: 56  RDVFKKKSSPCETDVNSNAEHIGGESIWGKIQRMSVSNCQNR 97


>Z82059-2|CAB04876.3|  557|Caenorhabditis elegans Hypothetical
           protein T27E9.5 protein.
          Length = 557

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 681 LINNCPISFIIY*WLLEELKYFMVDNI 601
           L   C +SF+++ WLL EL  F + ++
Sbjct: 388 LRRTCLLSFLVFFWLLAELNTFFIKHV 414


>AF068709-5|AAC19250.2|  332|Caenorhabditis elegans Serpentine
           receptor, class t protein29 protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 271 WCPDCVEAEPVVRHYLSELDKSIIFVYVDVGDREY 375
           WC  C+ A  +V + L +L KS +   +  G+R Y
Sbjct: 119 WCCSCIIAMILVMNRLLDLSKSTLSTLIFEGNRTY 153


>AF045642-1|AAZ82857.1|  230|Caenorhabditis elegans Hypothetical
           protein C17H12.13 protein.
          Length = 230

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = -2

Query: 636 LEELKYFMVDNIIYSYVIVGNLSI---RICLKRI 544
           LEE+  F++DN   +  I+ +L I   +ICLK +
Sbjct: 18  LEEIVQFLIDNFAQTEAILASLKIDDDKICLKEL 51


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,814,349
Number of Sequences: 27780
Number of extensions: 309314
Number of successful extensions: 776
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)