Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24d22
         (681 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P41426 Cluster: Uncharacterized 36.6 kDa protein in EGT...   177   3e-43
UniRef50_Q2NP66 Cluster: Actin rearrangement inducing factor 1; ...    68   2e-10
UniRef50_Q1HGX2 Cluster: Arif-1; n=1; Antheraea pernyi nucleopol...    66   6e-10
UniRef50_Q91GN2 Cluster: ARIF-1; n=1; Epiphyas postvittana NPV|R...    66   1e-09
UniRef50_O10280 Cluster: Uncharacterized 34.7 kDa protein; n=1; ...    53   6e-06
UniRef50_P41425 Cluster: Uncharacterized 8.0 kDa protein in EGT-...    48   2e-04
UniRef50_Q4X2H0 Cluster: Putative uncharacterized protein; n=6; ...    34   3.7  
UniRef50_Q5M8V9 Cluster: WNT1 inducible signaling pathway protei...    33   6.4  
UniRef50_UPI00004994B0 Cluster: hypothetical protein 197.t00010;...    33   8.5  

>UniRef50_P41426 Cluster: Uncharacterized 36.6 kDa protein in
           EGT-IAP1 intergenic region; n=6;
           Nucleopolyhedrovirus|Rep: Uncharacterized 36.6 kDa
           protein in EGT-IAP1 intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 319

 Score =  177 bits (430), Expect = 3e-43
 Identities = 93/137 (67%), Positives = 97/137 (70%)
 Frame = +3

Query: 6   DHEPTVFNQNYSVIIMGVLTILAVQCWNLYVQLKEMRRNIYIKRRAEAEKASYDHYCDID 185
           DHEPTVFNQNY VIIMGVLTILAVQCWNLYVQLKEMR NIY+KRRAEAEKASY+HYCDID
Sbjct: 186 DHEPTVFNQNYPVIIMGVLTILAVQCWNLYVQLKEMRHNIYMKRRAEAEKASYEHYCDID 245

Query: 186 YCLEEERESNSKLLEVVSEGRNSSSVAAVXXXXXXXXXXXXXXXXXXXXXFIALSDLTXX 365
           Y   EERESNS+LLEVVSEGRNSSSV AV                     FIA SDL+  
Sbjct: 246 Y-RREERESNSRLLEVVSEGRNSSSVVAV--THPPSTTSTTTSVSETLSSFIAPSDLSSQ 302

Query: 366 XXXXXXXXXXFGNHNEF 416
                     FGNHNEF
Sbjct: 303 PSPSSHPSSPFGNHNEF 319


>UniRef50_Q2NP66 Cluster: Actin rearrangement inducing factor 1;
           n=4; Nucleopolyhedrovirus|Rep: Actin rearrangement
           inducing factor 1 - Hyphantria cunea nuclear
           polyhedrosis virus (HcNPV)
          Length = 365

 Score = 67.7 bits (158), Expect = 2e-10
 Identities = 32/82 (39%), Positives = 52/82 (63%)
 Frame = +3

Query: 3   RDHEPTVFNQNYSVIIMGVLTILAVQCWNLYVQLKEMRRNIYIKRRAEAEKASYDHYCDI 182
           R +EPT+FNQN   ++M  + ++ + CWN+Y+  KEMR+   I +  E+ +  YD   D 
Sbjct: 188 RHNEPTIFNQNQVALMMIAILLIVLHCWNMYILRKEMRKRPVI-QSGESAELKYD---DT 243

Query: 183 DYCLEEERESNSKLLEVVSEGR 248
           D   EE+ +SN ++LE++SE R
Sbjct: 244 DKEEEEQFQSNKRMLEIISEDR 265


>UniRef50_Q1HGX2 Cluster: Arif-1; n=1; Antheraea pernyi
           nucleopolyhedrovirus|Rep: Arif-1 - Antheraea pernyi
           nuclear polyhedrosis virus (ApNPV)
          Length = 324

 Score = 66.5 bits (155), Expect = 6e-10
 Identities = 37/86 (43%), Positives = 53/86 (61%)
 Frame = +3

Query: 3   RDHEPTVFNQNYSVIIMGVLTILAVQCWNLYVQLKEMRRNIYIKRRAEAEKASYDHYCDI 182
           R +EPTVF +N   + + V  I  +QCWN YV+ K+MR     + + +A+  S D Y   
Sbjct: 183 RHNEPTVFTENQWTVTVAVFMIFVIQCWNAYVRHKDMR----FQPKQDAQ--SVDGYDTA 236

Query: 183 DYCLEEERESNSKLLEVVSEGRNSSS 260
           D   EEER+S  +LLE+VSEGR S++
Sbjct: 237 DE--EEERQSKLRLLEIVSEGRQSAT 260


>UniRef50_Q91GN2 Cluster: ARIF-1; n=1; Epiphyas postvittana NPV|Rep:
           ARIF-1 - Epiphyas postvittana nucleopolyhedrovirus
           (EppoMNPV)
          Length = 307

 Score = 65.7 bits (153), Expect = 1e-09
 Identities = 39/86 (45%), Positives = 50/86 (58%)
 Frame = +3

Query: 12  EPTVFNQNYSVIIMGVLTILAVQCWNLYVQLKEMRRNIYIKRRAEAEKASYDHYCDIDYC 191
           EPTVFNQN S +IM  LTI+ + CWN+YVQ KEMR     K     E      Y      
Sbjct: 187 EPTVFNQNPSALIMMTLTIIIIFCWNMYVQQKEMR----TKPEPAVESNEEGGY------ 236

Query: 192 LEEERESNSKLLEVVSEGRNSSSVAA 269
             +E ES  +LLEV++EGR+S++  A
Sbjct: 237 TTDEEESQLRLLEVMTEGRSSTTGTA 262


>UniRef50_O10280 Cluster: Uncharacterized 34.7 kDa protein; n=1;
           Orgyia pseudotsugata MNPV|Rep: Uncharacterized 34.7 kDa
           protein - Orgyia pseudotsugata multicapsid polyhedrosis
           virus (OpMNPV)
          Length = 298

 Score = 53.2 bits (122), Expect = 6e-06
 Identities = 29/73 (39%), Positives = 37/73 (50%)
 Frame = +3

Query: 3   RDHEPTVFNQNYSVIIMGVLTILAVQCWNLYVQLKEMRRNIYIKRRAEAEKASYDHYCDI 182
           R  EPTVFNQN   + M  L  + + CWN+YVQ KE RR    + R        +   + 
Sbjct: 179 RHDEPTVFNQNQGALTMLALLAIVMHCWNMYVQQKETRRKPN-RARNITNTLLMETEKEY 237

Query: 183 DYCLEEERESNSK 221
           D   EEE ESN +
Sbjct: 238 DTAEEEEHESNMR 250


>UniRef50_P41425 Cluster: Uncharacterized 8.0 kDa protein in
           EGT-IAP1 intergenic region; n=1; Autographa californica
           nucleopolyhedrovirus|Rep: Uncharacterized 8.0 kDa
           protein in EGT-IAP1 intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 69

 Score = 48.4 bits (110), Expect = 2e-04
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = +3

Query: 522 DEEIISRRTPTFSPKLLRKSKELS 593
           DEEIISRRTPTFSPKL RKS+ELS
Sbjct: 7   DEEIISRRTPTFSPKLFRKSRELS 30


>UniRef50_Q4X2H0 Cluster: Putative uncharacterized protein; n=6;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 1666

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -1

Query: 255 CYFCLRKPLPAI*SYFLVLLRGNSQCRNNDHKMLFRLRRAFLC 127
           CYFC++  LP + S++L  +     C+N + K + +   A LC
Sbjct: 853 CYFCIKYNLPILNSFYLFNILHTMDCKNKEMKKMGQDHIAELC 895


>UniRef50_Q5M8V9 Cluster: WNT1 inducible signaling pathway protein
           2; n=3; Xenopus|Rep: WNT1 inducible signaling pathway
           protein 2 - Xenopus tropicalis (Western clawed frog)
           (Silurana tropicalis)
          Length = 312

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 442 PSRCTTCPRKFCVPHRTRAQCASLRCR 522
           P+ C TCP K C P++T     +  CR
Sbjct: 269 PTFCGTCPMKHCAPYQTENDLVAFHCR 295


>UniRef50_UPI00004994B0 Cluster: hypothetical protein 197.t00010;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 197.t00010 - Entamoeba histolytica HM-1:IMSS
          Length = 301

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +3

Query: 474 LCTTPDAC-TMCQPPLPDEEIISRRTPTFSPKLLRK 578
           LC     C  + QPP P E  + RRTP F+ K L K
Sbjct: 56  LCRYQQLCEVLTQPPFPHELTLPRRTPNFALKYLPK 91


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,930,200
Number of Sequences: 1657284
Number of extensions: 9058990
Number of successful extensions: 27975
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 26600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27957
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)