Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24d19
(643 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070064-1|AAH70064.1| 760|Homo sapiens cyclin D binding myb-li... 34 0.49
BC029370-1|AAH29370.1| 200|Homo sapiens DMTF1 protein protein. 34 0.49
AF202145-1|AAG35614.1| 285|Homo sapiens cyclin D-binding Myb-li... 34 0.49
AF202144-1|AAG35613.1| 272|Homo sapiens cyclin D-binding Myb-li... 34 0.49
AF084530-1|AAC33480.1| 760|Homo sapiens cyclin-D binding Myb-li... 34 0.49
AC005076-1|AAD43181.1| 760|Homo sapiens cyclin-D binding Myb-li... 34 0.49
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 33 0.65
U51549-1|AAA93037.1| 123|Homo sapiens immunoglobulin heavy chai... 30 6.1
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 30 8.0
AF019764-1|AAC97160.1| 142|Homo sapiens G protein-coupled recep... 30 8.0
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 30 8.0
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 30 8.0
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 30 8.0
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 30 8.0
>BC070064-1|AAH70064.1| 760|Homo sapiens cyclin D binding myb-like
transcription factor 1 protein.
Length = 760
Score = 33.9 bits (74), Expect = 0.49
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 218 VEETSDDLRSEKSSGGTWLSDSDADSVIHVPANAGSECDSESERE 352
VEE SD + E + T D++ + ++H P N E DSE E
Sbjct: 4 VEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIE 48
>BC029370-1|AAH29370.1| 200|Homo sapiens DMTF1 protein protein.
Length = 200
Score = 33.9 bits (74), Expect = 0.49
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 218 VEETSDDLRSEKSSGGTWLSDSDADSVIHVPANAGSECDSESERE 352
VEE SD + E + T D++ + ++H P N E DSE E
Sbjct: 4 VEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIE 48
>AF202145-1|AAG35614.1| 285|Homo sapiens cyclin D-binding Myb-like
protein gamma protein.
Length = 285
Score = 33.9 bits (74), Expect = 0.49
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 218 VEETSDDLRSEKSSGGTWLSDSDADSVIHVPANAGSECDSESERE 352
VEE SD + E + T D++ + ++H P N E DSE E
Sbjct: 4 VEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIE 48
>AF202144-1|AAG35613.1| 272|Homo sapiens cyclin D-binding Myb-like
protein beta protein.
Length = 272
Score = 33.9 bits (74), Expect = 0.49
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 218 VEETSDDLRSEKSSGGTWLSDSDADSVIHVPANAGSECDSESERE 352
VEE SD + E + T D++ + ++H P N E DSE E
Sbjct: 4 VEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIE 48
>AF084530-1|AAC33480.1| 760|Homo sapiens cyclin-D binding Myb-like
protein protein.
Length = 760
Score = 33.9 bits (74), Expect = 0.49
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 218 VEETSDDLRSEKSSGGTWLSDSDADSVIHVPANAGSECDSESERE 352
VEE SD + E + T D++ + ++H P N E DSE E
Sbjct: 4 VEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIE 48
>AC005076-1|AAD43181.1| 760|Homo sapiens cyclin-D binding Myb-like
protein protein.
Length = 760
Score = 33.9 bits (74), Expect = 0.49
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 218 VEETSDDLRSEKSSGGTWLSDSDADSVIHVPANAGSECDSESERE 352
VEE SD + E + T D++ + ++H P N E DSE E
Sbjct: 4 VEEDSDTVTVETVNSVTLTQDTEGNLILHCPQNEADEIDSEDSIE 48
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 33.5 bits (73), Expect = 0.65
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Frame = +3
Query: 366 RSDDAASGIPRPQAPTHFRAP-RASLNSSHSKGHARLPPRRACRQTPSSXXXXXXXXXEC 542
R+ AS RP + R P R SL +SH R+PPR + + P
Sbjct: 213 RTPPRASPTRRPPRASPTRTPPRESLRTSHRASPTRMPPRASPTRRPPRASPTGSPPRAS 272
Query: 543 PQPEPICLPKT*ARTVDT 596
P P P+T R T
Sbjct: 273 PMTPPRASPRTPPRASPT 290
Score = 29.9 bits (64), Expect = 8.0
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 363 RRSDDAASGIPRPQAPTHFRAPRAS-LNSSHSKGHARLPPRRACRQTPSS 509
R+ A+ P +PT R PRAS + S H R PPR + TPS+
Sbjct: 89 RKPPRASPRTPSRASPTR-RLPRASPMGSPHRASPMRTPPRASPTGTPST 137
>U51549-1|AAA93037.1| 123|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 123
Score = 30.3 bits (65), Expect = 6.1
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 22 RSDRLLYNTMLKSKFEKEIFKNRTRSVL*CDVMTSGDVCVFYLNAEPATSIG**WQYSRF 201
+S +YN LKS+ + ++ + L +T+ D V+Y EP G W+Y F
Sbjct: 53 KSGSTIYNPSLKSRVTISVDTSKNQFSLKLTSVTAADTAVYYCAREPPRGSG--WRYWYF 110
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 29.9 bits (64), Expect = 8.0
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -3
Query: 545 RALASVEETVEETRGSLATGSARREPRMTFRVTRIERGSRSAKVSRSLRARNPAR 381
R S E ++R S+R P +T R R+ R SRSA S R+R P R
Sbjct: 1670 RGSRSSPEPKTKSRTPPRRRSSRSSPELT-RKARLSRRSRSASSSPETRSRTPPR 1723
>AF019764-1|AAC97160.1| 142|Homo sapiens G protein-coupled receptor
kinase 1b protein.
Length = 142
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 245 SEKSSGGTWLSDSDADSVIHVPANA 319
S +S+GG WL S + VIH PA A
Sbjct: 118 SPRSNGGQWLRPSAGEKVIHPPALA 142
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 29.9 bits (64), Expect = 8.0
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -3
Query: 545 RALASVEETVEETRGSLATGSARREPRMTFRVTRIERGSRSAKVSRSLRARNPAR 381
R S E ++R S+R P +T R R+ R SRSA S R+R P R
Sbjct: 702 RGSRSSPEPKTKSRTPPRRRSSRSSPELT-RKARLSRRSRSASSSPETRSRTPPR 755
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 29.9 bits (64), Expect = 8.0
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -3
Query: 545 RALASVEETVEETRGSLATGSARREPRMTFRVTRIERGSRSAKVSRSLRARNPAR 381
R S E ++R S+R P +T R R+ R SRSA S R+R P R
Sbjct: 1670 RGSRSSPEPKTKSRTPPRRRSSRSSPELT-RKARLSRRSRSASSSPETRSRTPPR 1723
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 29.9 bits (64), Expect = 8.0
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -3
Query: 545 RALASVEETVEETRGSLATGSARREPRMTFRVTRIERGSRSAKVSRSLRARNPAR 381
R S E ++R S+R P +T R R+ R SRSA S R+R P R
Sbjct: 193 RGSRSSPEPKTKSRTPPRRRSSRSSPELT-RKARLSRRSRSASSSPETRSRTPPR 246
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 29.9 bits (64), Expect = 8.0
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -3
Query: 545 RALASVEETVEETRGSLATGSARREPRMTFRVTRIERGSRSAKVSRSLRARNPAR 381
R S E ++R S+R P +T R R+ R SRSA S R+R P R
Sbjct: 1718 RGSRSSPEPKTKSRTPPRRRSSRSSPELT-RKARLSRRSRSASSSPETRSRTPPR 1771
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,505,734
Number of Sequences: 237096
Number of extensions: 1649759
Number of successful extensions: 7362
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7361
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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