Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24d18
         (625 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    27   0.64 
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    25   2.6  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   3.4  
AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding pr...    23   6.0  
AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding pr...    23   6.0  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   6.0  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 408 VKVSEVQAMVENHLKDMILKTFDPKK 485
           +K  E QA++E HL++     +DP++
Sbjct: 148 IKHGETQAVIEIHLENTAFNAYDPER 173


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 252 PDYIMEPGIFGQLKRYFQAGGNPEQVIEQLSMNYNA 359
           PD  ++P  F Q++   +A   P ++   + +NY A
Sbjct: 165 PDQFIDPAAFPQIREEGRAVLQPNRMSIDIPLNYTA 200


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3

Query: 402  GGVKVSEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLT 533
            GG +   V A V +H K+    T  PK   T     G TP  +T
Sbjct: 1136 GGAEYMNVPAAVTHHTKEDERMTARPKLGRTPSDTGGPTPHLVT 1179


>AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding
           protein AgamOBP50 protein.
          Length = 166

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 549 PTWRSLIYRLAEEYPDCL 602
           PT+ + +  +AE+YPD L
Sbjct: 38  PTYGNCLQTIAEKYPDAL 55


>AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding
           protein OBPjj6b protein.
          Length = 315

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 549 PTWRSLIYRLAEEYPDCL 602
           PT+ + +  +AE+YPD L
Sbjct: 187 PTYGNCLQTIAEKYPDAL 204


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 247 KLQTTLWNLVFLVSLKDTS 303
           +L   LWN+V  + LK TS
Sbjct: 761 ELSEVLWNMVLSMGLKQTS 779


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,656
Number of Sequences: 2352
Number of extensions: 11552
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)