Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24d04
         (603 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    25   0.43 
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    24   1.00 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   2.3  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   2.3  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   2.3  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   3.0  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   4.0  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   9.3  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -3

Query: 289 LSPPSRTNAPLRTKCRSSSVRQ 224
           L PP R N PL +   SS VRQ
Sbjct: 490 LPPPYRLNKPLMSLITSSEVRQ 511


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 24.2 bits (50), Expect = 1.00
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 33  IAPPTNNVYITTLQPHSL 86
           ++P TNN+Y + L  HSL
Sbjct: 259 LSPVTNNLYYSPLTSHSL 276


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 508 FTDYDQFALVWSCXXVSLAHSDRIWVL 588
           F  YD  + + S   +++   DR+WVL
Sbjct: 112 FAKYDDCSGIVSASKLAIDKCDRLWVL 138


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 508 FTDYDQFALVWSCXXVSLAHSDRIWVL 588
           F  YD  + + S   +++   DR+WVL
Sbjct: 112 FAKYDDCSGIVSASKLAIDKCDRLWVL 138


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 508 FTDYDQFALVWSCXXVSLAHSDRIWVL 588
           F  YD  + + S   +++   DR+WVL
Sbjct: 112 FAKYDDCSGIVSASKLAIDKCDRLWVL 138


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 33  IAPPTNNVYITTLQPHSL 86
           ++P TNN+Y + L  H L
Sbjct: 256 LSPVTNNLYYSPLASHGL 273



 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +1

Query: 469 GRLLPGAGQYNILFTDYDQFALVWSCXXVSLAHSDRIWVL 588
           GRLL     ++  F ++   + + S   +++   DR+WVL
Sbjct: 102 GRLLKPYPDWS--FAEFKDCSKIVSAFKIAIDKFDRLWVL 139


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 33  IAPPTNNVYITTLQPHSL 86
           ++P TNN+Y + L  H L
Sbjct: 261 LSPVTNNLYYSPLLSHGL 278



 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 508 FTDYDQFALVWSCXXVSLAHSDRIWVL 588
           F  Y+  + + S   +++   DR+WVL
Sbjct: 118 FAKYEDCSGIVSAFKIAVDKFDRLWVL 144


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 33  IAPPTNNVYITTLQPHSL 86
           ++P T N+Y + L  H+L
Sbjct: 256 LSPLTQNLYYSALSSHNL 273


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,554
Number of Sequences: 438
Number of extensions: 3895
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)