Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24d03
         (134 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    19   3.5  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    19   4.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    19   4.6  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    18   8.0  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -3

Query: 51  FTCKILKSFLNPQC 10
           F CK    F+ P+C
Sbjct: 282 FECKCPPGFVGPRC 295


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 93  IFVTIVFFLCST 58
           I + +VFF+C T
Sbjct: 278 IIIVLVFFVCWT 289


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 93  IFVTIVFFLCST 58
           I + +VFF+C T
Sbjct: 278 IIIVLVFFVCWT 289


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 78  VFFLCSTF*FTCKILKSFLNPQ 13
           + F  S+  + C++L SFL  Q
Sbjct: 228 LLFSVSSSSYNCEVLFSFLIDQ 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,460
Number of Sequences: 336
Number of extensions: 165
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 25
effective length of database: 114,185
effective search space used:  2169515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)