Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24c22
         (201 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   0.57 
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   1.3  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    23   1.7  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    22   3.0  
DQ396550-1|ABD60145.1|  113|Anopheles gambiae adipokinetic hormo...    20   9.3  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    20   9.3  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    20   9.3  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 0.57
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 118  GMFGARSTPVTGRPGIAVPPGSAL 189
            G  G+ +    G PG+AV PGS L
Sbjct: 3207 GAGGSTAPGAGGVPGVAVVPGSGL 3230


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 136 STPVTGRPGIAVPPGSA 186
           ++PVTG PG+A  P  A
Sbjct: 534 ASPVTGLPGVAPVPALA 550


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -2

Query: 176 GGTAMPGRPVTGVERAPNIPSFYKNQFNILVPQ*GNFQIL 57
           GG A+   P +    APN    YK Q N+ V +   FQ +
Sbjct: 172 GGAAIRTAPASPFPSAPNQQIIYKEQ-NLQVQKVPAFQAM 210


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = -2

Query: 176 GGTAMPGRPVTGVERAPNIPSFYKNQ-FNILVPQ*GNFQIL 57
           GG A+   P +    APN    YK Q  N+ V +   FQ +
Sbjct: 177 GGAAIRTAPASPFPSAPNQQIIYKEQTANLQVQKVPAFQAM 217


>DQ396550-1|ABD60145.1|  113|Anopheles gambiae adipokinetic hormone
           II protein.
          Length = 113

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 197 FFKRADPGGTAMPGRPVTGV 138
           F +  + G  AMP  PV+GV
Sbjct: 35  FSRDWNAGKRAMPDSPVSGV 54


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 34  CSICSFQLNI*KFP 75
           CSIC+ Q  + ++P
Sbjct: 142 CSICAAQTTVKRYP 155


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 145 VTGRPGIAVPPGS 183
           + G+PGIA P G+
Sbjct: 390 IPGQPGIAGPAGA 402


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,245
Number of Sequences: 2352
Number of extensions: 3936
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 44
effective length of database: 460,491
effective search space used: 10130802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)