Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24c01
(696 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 324 1e-87
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 273 2e-72
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 229 4e-59
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 174 2e-42
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 168 1e-40
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 161 1e-38
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 159 8e-38
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 153 5e-36
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 141 1e-32
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 140 4e-32
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 139 5e-32
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 130 3e-29
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 128 1e-28
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 102 7e-21
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 92 1e-17
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 50 7e-05
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 49 1e-04
UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein ... 44 0.003
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 44 0.003
UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albic... 40 0.044
UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7; n... 40 0.077
UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211; Bacter... 39 0.10
UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|R... 39 0.13
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 38 0.31
UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n... 37 0.41
UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.72
UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.72
UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyc... 36 1.3
UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7; n... 35 2.2
UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD... 35 2.2
UniRef50_Q9HWD1 Cluster: 30S ribosomal protein S7; n=89; Bacteri... 34 2.9
UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2; ... 34 3.8
UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor; ... 33 5.1
UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_P14760 Cluster: Plastid 30S ribosomal protein S7; n=1; ... 33 6.7
UniRef50_Q4Z220 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 324 bits (797), Expect = 1e-87
Identities = 153/170 (90%), Positives = 162/170 (95%)
Frame = +3
Query: 186 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 365
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 366 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 545
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 546 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELI 695
GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELI
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELI 178
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 273 bits (670), Expect = 2e-72
Identities = 130/164 (79%), Positives = 148/164 (90%), Gaps = 1/164 (0%)
Frame = +3
Query: 207 EIKLFGRWSCYDVQVSDMSLQDYISV-KEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTN 383
E+KLF RWS DVQ+SD+SL DYI V K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67
Query: 384 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 563
SLMMHGRNNGKKLMAVRI+KHA EIIHLLT +NP+QV+V A++NSGPRED+TRIG AG V
Sbjct: 68 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 127
Query: 564 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELI 695
RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIK+IAEC+ADELI
Sbjct: 128 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELI 171
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 229 bits (561), Expect = 4e-59
Identities = 117/181 (64%), Positives = 144/181 (79%)
Frame = +3
Query: 153 AGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYA 332
A S++ + +SL + IKLF ++ V+V D+SL DYI++ + LPH+AGR+
Sbjct: 2 AASIIPKEVSLDETG---HIKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRFQ 56
Query: 333 HKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAII 512
KRFRKA+C IVERLTNSLMM+GRNNGKKL+A RIVKHAFEII LLT +NPLQVLV A+
Sbjct: 57 TKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVA 116
Query: 513 NSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADEL 692
GPREDSTRIG AGTVRRQAVDVSPLRRVNQA+ L+ GAREAAFRN+K+I+EC+A+E+
Sbjct: 117 ACGPREDSTRIGSAGTVRRQAVDVSPLRRVNQALALITIGAREAAFRNVKSISECLAEEI 176
Query: 693 I 695
I
Sbjct: 177 I 177
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 174 bits (423), Expect = 2e-42
Identities = 75/163 (46%), Positives = 116/163 (71%)
Frame = +3
Query: 207 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 386
++K+F RW V+++D+S+ +YI +KY + +PHS+G Y K F+K CPI+ERL S
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVPHSSGNYDKKPFKKTYCPILERLVCS 78
Query: 387 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 566
LM+ RN+GKK+ + IVKHAF ++H TG+NP+Q+LV AI N P EDS + +G +
Sbjct: 79 LMLKSRNSGKKIKTIAIVKHAFYLLHKTTGKNPIQLLVDAISNCAPHEDSLMLSNSGQKK 138
Query: 567 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELI 695
R+AVDVSP R+++QAI+ + G ++AAF+N K+I+ + DE++
Sbjct: 139 REAVDVSPYRKISQAIYFIAVGTKKAAFKNPKSISIALHDEIL 181
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 168 bits (409), Expect = 1e-40
Identities = 85/163 (52%), Positives = 114/163 (69%)
Frame = +3
Query: 207 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 386
E+K+FG+W +V+V D L+DYI +K Y LPH+ GR+A KRF KA+ PIVERL N
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLKPMY---LPHTGGRHAKKRFAKAEVPIVERLINR 68
Query: 387 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 566
+M +N GKK +A IVK AF+IIH TGENP+QVLV A+ N+ PRE++T I G
Sbjct: 69 VMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETTTIIYGGISY 128
Query: 567 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELI 695
+AVD SP RR++ A+ L+ GA++ AFRN K I EC+A+E+I
Sbjct: 129 HEAVDSSPQRRLDIALRLITEGAQQRAFRNPKPIEECLAEEII 171
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 161 bits (392), Expect = 1e-38
Identities = 84/163 (51%), Positives = 116/163 (71%)
Frame = +3
Query: 207 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 386
EI LF ++S +V+V+++SL+ YI++ + +PH+A KA+ PI ER S
Sbjct: 22 EINLFEKYSYEEVKVNNVSLRPYINLSRR--GIVPHAATTITKGTTGKARIPIAERFVCS 79
Query: 387 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 566
LM HGRN+GKK +A+ I + A IIH +T +NPLQVLV AI+NSGPRED+ RIGRAG++R
Sbjct: 80 LMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGRAGSMR 139
Query: 567 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELI 695
R +VDVSPL+R++ AI L G R A+FRN T+AE +A+ELI
Sbjct: 140 RTSVDVSPLKRISIAISNLSAGIRNASFRNRITLAEAIANELI 182
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 159 bits (385), Expect = 8e-38
Identities = 84/162 (51%), Positives = 106/162 (65%)
Frame = +3
Query: 210 IKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSL 389
I LFG+WS DV V D L+ YI +K LPH+ GRY + RF KA+ PIVERL N +
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPVI---LPHTEGRYQNTRFGKARIPIVERLINLM 95
Query: 390 MMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRR 569
M GRN GKK A IVK AF++I+ TG+NPLQV + AIIN+ PRE+ TRI G
Sbjct: 96 MRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRIIMGGIAYS 155
Query: 570 QAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELI 695
+VDVSP RR++ A+ + GAR +F N K I EC+ADE+I
Sbjct: 156 VSVDVSPQRRLDLALRWITEGARACSFNNPKPIEECLADEII 197
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 153 bits (370), Expect = 5e-36
Identities = 73/81 (90%), Positives = 77/81 (95%)
Frame = +3
Query: 453 EIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG 632
++ HLL +NPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG 233
Query: 633 AREAAFRNIKTIAECVADELI 695
AREAAFRNIKTIAEC+ADELI
Sbjct: 234 AREAAFRNIKTIAECLADELI 254
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 141 bits (342), Expect = 1e-32
Identities = 68/161 (42%), Positives = 108/161 (67%)
Frame = +3
Query: 213 KLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 392
K+FG+W +V+V D+ ++ Y+S+ +PHS+G++A ++F K++ IVERL N+LM
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTPVI---VPHSSGKHARQQFNKSEISIVERLANNLM 62
Query: 393 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQ 572
N GKK + +R V+ AF+I++ T +NP+QVLV AI N+GPRE+ R+ G +
Sbjct: 63 RTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPK 122
Query: 573 AVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELI 695
AVD +P RRV+ A+ + G AAF++ +++AEC+A ELI
Sbjct: 123 AVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELI 163
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 140 bits (338), Expect = 4e-32
Identities = 76/190 (40%), Positives = 114/190 (60%)
Frame = +3
Query: 123 EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 302
E+ D+ EA + +T + A KLFG+W ++ D S + Y++V
Sbjct: 4 EQPAEDETEEAAAESEDTQEVAANA-----KLFGKWDVAEIHYEDPSTRRYLAVTP---- 54
Query: 303 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 482
+ H+ GR+A K+F+K++ IVERL N LM G N GKK A++IV+ AF+I+H T EN
Sbjct: 55 -VAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDEN 113
Query: 483 PLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIK 662
P+QVLV+A+ N+ PRE++ R+ G QAVD +P RRV+QA+ L GA A+F+
Sbjct: 114 PIQVLVSAVENAAPREETVRLKYGGISVPQAVDTAPQRRVDQALKFLADGAHSASFKTPT 173
Query: 663 TIAECVADEL 692
AE +A++L
Sbjct: 174 DAAEALANQL 183
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 139 bits (337), Expect = 5e-32
Identities = 74/163 (45%), Positives = 103/163 (63%)
Frame = +3
Query: 207 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 386
EIKLFG+W V V D SL+ +IS+ +PH+AGR + K F K + +VERL N
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISLNPVL---IPHTAGRNSKKMFDKNKMHVVERLANK 64
Query: 387 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 566
LM N GKK + I++ A I+ T ENP+QV+V A+ NSGPRE++TRI G
Sbjct: 65 LMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAF 124
Query: 567 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELI 695
Q+VDVSP RR++ A + GA + A ++ K+IA+C+ADEL+
Sbjct: 125 LQSVDVSPSRRLDTAFRNISLGASQGAHKSKKSIAQCLADELV 167
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 130 bits (314), Expect = 3e-29
Identities = 77/179 (43%), Positives = 106/179 (59%), Gaps = 16/179 (8%)
Frame = +3
Query: 207 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 386
EIK+ GRWS DV+V D SL+ YI+++ + LPH+ GR+A K F KA IVERL N
Sbjct: 17 EIKVMGRWSTEDVEVKDPSLKPYINLEPRL---LPHTHGRHAKKHFGKANVHIVERLINK 73
Query: 387 LMMHGRN----------------NGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINS 518
+M G + N KK+ A +VK AF+II TG+NP+QVLV AI N+
Sbjct: 74 VMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENA 133
Query: 519 GPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELI 695
PRED+T + G AVD+SPLRR++ A+ + GA +R + AE +A+E+I
Sbjct: 134 APREDTTSVMFGGIRYHVAVDISPLRRLDVALRNIALGASAKCYRTKMSFAEALAEEII 192
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 128 bits (309), Expect = 1e-28
Identities = 69/177 (38%), Positives = 108/177 (61%), Gaps = 2/177 (1%)
Frame = +3
Query: 171 ETMSLPQAADIPEIK--LFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 344
E + P+ P+ K LF +W +V+V+D SL Y+++ + +PHS G+++ + F
Sbjct: 5 EVKAQPEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQI---IPHSCGKFSRQEF 61
Query: 345 RKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 524
KA IVERL N LM N GKK +A+ IV+ AFE+I+ T NP++VLV AI N+GP
Sbjct: 62 NKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGP 121
Query: 525 REDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELI 695
RE++ R+ G ++VD +PLRRV+ AI + +++ ++ K + +ADELI
Sbjct: 122 REETVRLKYGGINVPKSVDTAPLRRVDSAIGFIAEAVWKSSRKSKKPASAILADELI 178
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 102 bits (245), Expect = 7e-21
Identities = 56/152 (36%), Positives = 93/152 (61%), Gaps = 1/152 (0%)
Frame = +3
Query: 243 VQVSDMSLQDYISVKEKYAKYLP-HSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKK 419
+Q+ D L YI++ YL + GR+++ K +ERL N+LM + GKK
Sbjct: 9 IQIKDQGLATYINL----TSYLNLDTGGRFSNYLSGKRNVNTIERLLNNLMRTEKWTGKK 64
Query: 420 LMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRR 599
A +++ AF+II T +NP+Q+LV+AI NS PRE+ TR+ G ++VDVSP RR
Sbjct: 65 YSAYKVMSQAFDIIATKTKQNPVQILVSAIENSAPREEVTRLKYGGIAVPKSVDVSPSRR 124
Query: 600 VNQAIWLLCTGAREAAFRNIKTIAECVADELI 695
+++A+ + GA +A+F++ I +C+A+E++
Sbjct: 125 LDEALRNIARGATKASFKHKIHIQDCLANEIL 156
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 92.3 bits (219), Expect = 1e-17
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +3
Query: 351 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 506
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +3
Query: 117 MAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYIS 281
M+E D+ E V E + Q A++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 49.6 bits (113), Expect = 7e-05
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Frame = +3
Query: 336 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 515
KRF +A L + L+ +GKK +A IV AFEII + T E+PL V AI N
Sbjct: 9 KRFPEADSTYNSYLVSLLITRILKSGKKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRN 68
Query: 516 SGP--REDSTRIGRAGTVRRQAVDVSPLRRVNQAI-WLL 623
+ P + RIG G+ + V+VS R N ++ W++
Sbjct: 69 ASPVVEVKARRIG--GSTYQVPVEVSGFRATNLSLRWII 105
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = -3
Query: 457 ISNACLTIRTAISFLPLFRPCIIREFVRRSTIGHWALRKRLCAYLPAE*GKYFAY 293
+S A LT+ A FLP+F P I F+ ST+G W L KRLC+ LP G+Y +
Sbjct: 1 MSKAFLTMWYARCFLPMFLPGRITLFISLSTMGTWVLPKRLCSCLPPVCGRYTGF 55
>UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein S7;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein S7 - Candida albicans (Yeast)
Length = 251
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/87 (29%), Positives = 45/87 (51%)
Frame = +3
Query: 324 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 503
+YA+K+ P V+ LTN +M H GKK A ++V A I+ L ++P++VL
Sbjct: 105 KYANKKIPLRSDPTVDNLTNLIMRH----GKKAKAQKVVSRALYIVQLKLRKDPIEVLRE 160
Query: 504 AIINSGPREDSTRIGRAGTVRRQAVDV 584
+ GP +T+ G +++ V +
Sbjct: 161 TLDKLGPLV-NTKTMSTGVAKKRVVPI 186
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 44.4 bits (100), Expect = 0.003
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +3
Query: 372 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRED--STRI 545
RL N L + GKK +A RI+ +AF+II TGE+ + V +AI P + + RI
Sbjct: 21 RLVNMLTVRILKEGKKHLAQRIIYNAFDIIKQRTGEDAILVFESAIKKVTPLVEVKARRI 80
Query: 546 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNI 659
G G+ + ++V R N A+ + ARE A +++
Sbjct: 81 G--GSTYQVPMEVRAFRGTNLALRWITKYARERAGKSM 116
>UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albicans
IPF3361; n=2; Saccharomycetaceae|Rep: Similar to
CA4785|IPF3361 Candida albicans IPF3361 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 263
Score = 40.3 bits (90), Expect = 0.044
Identities = 25/91 (27%), Positives = 47/91 (51%)
Frame = +3
Query: 327 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 506
+A+KR P ++ TN +M +GKK A +I+ A I++L T ++PL +L
Sbjct: 118 FANKRIPLPSNPTIDNFTNLIM----RDGKKSKAQKILSRALYIVYLKTRKDPLVILEET 173
Query: 507 IINSGPREDSTRIGRAGTVRRQAVDVSPLRR 599
+ P +T++ + G + + V PL++
Sbjct: 174 LDKMAPLM-ATKVQKTGAAKNRTVPY-PLKK 202
>UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7;
n=94; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Zea mays (Maize)
Length = 156
Score = 39.5 bits (88), Expect = 0.077
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +3
Query: 330 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 509
A KR K+ RL N ++ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAI 66
Query: 510 INSGPRED-STRIGRAGTVRRQAVDVSPLRRVNQAI-WLL 623
P TR + G+ R+ +++ + AI WLL
Sbjct: 67 RRVTPNIGVKTRRNKKGSTRKVPIEIGSKQGRALAIRWLL 106
>UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211;
Bacteria|Rep: 30S ribosomal protein S7 - Streptococcus
pneumoniae
Length = 156
Score = 39.1 bits (87), Expect = 0.10
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Frame = +3
Query: 363 IVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTR 542
+V RL N +M+ +GK+ A IV AFE I TG + L+V TA+ N P + R
Sbjct: 22 LVTRLINRVML----DGKRGTAASIVYGAFEQIKEATGNDALEVFETAMENIMPVLE-VR 76
Query: 543 IGRAGTVRRQA-VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELI 695
R G Q V V P RR + L T AR R T+ + +A E++
Sbjct: 77 ARRVGGSNYQVPVKVRPERRTTLGLRWLVTIAR---LRGEHTMQDRLAKEIL 125
>UniRef50_A0ARS1 Cluster: 30S ribosomal protein S7; n=3; Poales|Rep:
30S ribosomal protein S7 - Elegia fenestrata
Length = 217
Score = 38.7 bits (86), Expect = 0.13
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Frame = +3
Query: 330 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 509
A KR K+ RL N ++ +GKK +A +I A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIYRNRLVNMVVNRIMKHGKKALAYQIFYRAAQKIQQ-TETNPLFVLREAI 65
Query: 510 INSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRN--IKTIAECV 680
P+ +AG R+ +++ P + AI L +R+ +N IK AE V
Sbjct: 66 RRITPQIGVKARRKAGLTRQVPIEIQPRQAKVLAIRWLLEASRKRPGQNMAIKLSAELV 124
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 37.5 bits (83), Expect = 0.31
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +3
Query: 366 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 524
V+ L N +M +GKK A +IV A II TGENP+ VL AI P
Sbjct: 126 VQHLVNLIM----RDGKKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISP 174
>UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n=3;
Chlorophyceae|Rep: Chloroplast 30S ribosomal protein S7
- Stigeoclonium helveticum (Green alga)
Length = 174
Score = 37.1 bits (82), Expect = 0.41
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Frame = +3
Query: 360 PIVERLTNSLMMHG-RNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDS 536
PI +++ ++++ NGKK +A RIV F I +NP++V A+ N PR +
Sbjct: 16 PIYNKVSVHMLVNRILKNGKKSIAYRIVYSVFRKISETMNQNPVEVWEKALNNVKPRVEV 75
Query: 537 TRIGRAGTVRRQAVDVSPLRRVNQAI---WLLCTGAREA 644
RAG++ +Q V P +AI W++ ++A
Sbjct: 76 KPRRRAGSI-QQVPRVMPSAERARAIAIRWIVSACQKKA 113
>UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. CcI3|Rep: Putative uncharacterized protein -
Frankia sp. (strain CcI3)
Length = 374
Score = 36.3 bits (80), Expect = 0.72
Identities = 29/99 (29%), Positives = 42/99 (42%)
Frame = +3
Query: 261 SLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIV 440
+LQ + + K A P +A R R + TN L G +G +A+
Sbjct: 93 NLQQELEYRNKVAPVAPAAADRTLRMRVSLHVGSTTDSGTNRL---GDGSGAARIALHRQ 149
Query: 441 KHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 557
A + HLL NP LV AI++S ED+ G +G
Sbjct: 150 LDAAAVRHLLEESNPRTTLVAAILSSRAYEDAVLSGYSG 188
>UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 299
Score = 36.3 bits (80), Expect = 0.72
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +3
Query: 360 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 524
P +E LTN LM +GKK A R + II +T NPL ++ AI + P
Sbjct: 164 PTLEFLTNLLM----KDGKKAQAQRFITRTLSIISSVTNSNPLPLIHDAIYKAAP 214
>UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyces
cerevisiae YJR113c RSM7; n=2; Saccharomycetales|Rep:
Similarities with sp|P47150 Saccharomyces cerevisiae
YJR113c RSM7 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 274
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 360 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 524
P V+ +TN +M H GKK A +I+ A +H T ++P+++L A+ + P
Sbjct: 139 PTVQHVTNMIMRH----GKKDRAQKIISRALYFLHCKTRKDPVELLKKALDDMAP 189
>UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7;
n=191; Magnoliophyta|Rep: Chloroplast 30S ribosomal
protein S7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 155
Score = 34.7 bits (76), Expect = 2.2
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +3
Query: 372 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP--REDSTRI 545
RL N L+ +GKK +A +I+ A + I T NPL VL AI P + R+
Sbjct: 21 RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80
Query: 546 GRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNI 659
G G+ + +++ + AI L +R+ RN+
Sbjct: 81 G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNM 116
>UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD+]
2, mitochondrial precursor; n=37; Saccharomycetales|Rep:
Glycerol-3-phosphate dehydrogenase [NAD+] 2,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 440
Score = 34.7 bits (76), Expect = 2.2
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +3
Query: 102 F*VPIMAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYIS 281
F V ++ NW +A+ V+ E L PE+++ W +D ++ D +L D I+
Sbjct: 84 FKVTVIGSGNWGTTIAK---VIAENTELHSHIFEPEVRM---W-VFDEKIGDENLTDIIN 136
Query: 282 VKEKYAKYLPH 314
+ + KYLP+
Sbjct: 137 TRHQNVKYLPN 147
>UniRef50_Q9HWD1 Cluster: 30S ribosomal protein S7; n=89;
Bacteria|Rep: 30S ribosomal protein S7 - Pseudomonas
aeruginosa
Length = 156
Score = 34.3 bits (75), Expect = 2.9
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Frame = +3
Query: 324 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 503
R A KR A ++ M H +GKK +A RIV A + + +PL+
Sbjct: 5 RVAAKREVLADPKYGSQILAKFMNHVMESGKKAVAERIVYGALDKVKERGKADPLETFEK 64
Query: 504 AIINSGPRED--STRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC 677
A+ P + S R+G G + V+V P RR A+ L AR+ R K++A
Sbjct: 65 ALDAIAPLVEVKSRRVG--GATYQVPVEVRPSRRNALAMRWLVDFARK---RGEKSMALR 119
Query: 678 VADELI 695
+A EL+
Sbjct: 120 LAGELL 125
>UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 468
Score = 33.9 bits (74), Expect = 3.8
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +3
Query: 114 IMAEENWNDDVAEAGSVVVE-TMSLPQAADIPEIKLF--GRWSCYDVQVSDMSLQDYISV 284
++AEENW +A+AG + + MS+ +D+ E+ L+ GR + ++++ D + Y S
Sbjct: 207 LVAEENWGQSIADAGGYMHKGKMSVWARSDMDEMCLWGAGRGNIGEIELQDH--KQYPSS 264
Query: 285 KEKYAKYLPHSAG 323
+ K+ + P G
Sbjct: 265 EFKFKTFTPPKTG 277
>UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor;
n=1; Desulfuromonas acetoxidans DSM 684|Rep: Multicopper
oxidase, type 3 precursor - Desulfuromonas acetoxidans
DSM 684
Length = 782
Score = 33.5 bits (73), Expect = 5.1
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 505 PLSTLDPVKIRLGSVVRVQFVVKPLMFHP 591
PLS D ++IR G VVR V + +M+HP
Sbjct: 507 PLSAGDDIRIRQGEVVRFMMVNRTMMYHP 535
>UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 589
Score = 33.1 bits (72), Expect = 6.7
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 369 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENP--LQVLVTAIINSGPREDSTR 542
ER ++ L+ + +K + V++ KH FEI+H + G P + VL T +++S R+ +
Sbjct: 477 ERNSSKLLSQRQKQYQKFLHVKM-KHVFEILHSIEGNKPYTMTVLSTLVVDS-LRDGNNP 534
Query: 543 IG 548
IG
Sbjct: 535 IG 536
>UniRef50_P14760 Cluster: Plastid 30S ribosomal protein S7; n=1;
Euglena longa|Rep: Plastid 30S ribosomal protein S7 -
Astasia longa (Euglenophycean alga)
Length = 178
Score = 33.1 bits (72), Expect = 6.7
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +3
Query: 405 NNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPR-EDSTRIGRAGTVRRQAVD 581
+ GKK +A I + + I + ENPL + A+ N+ P E T+ + G + + ++
Sbjct: 32 SKGKKNIARYIFYKSMQNIEKIKNENPLDIFKKAVDNATPSIELRTQKRKKGQISKISIK 91
Query: 582 VSPLRRVNQAIWLLCTGAREAAFRNI 659
RR A+ + A++ + +NI
Sbjct: 92 TKLERRNKIALKFIINSAKKRSEKNI 117
>UniRef50_Q4Z220 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 36
Score = 32.7 bits (71), Expect = 8.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 55 WYYKFCQVTVNKYNNIFRYQSWPRR 129
+YY + ++ +NKYN +F Y+ PRR
Sbjct: 10 FYYLYMKIFINKYNKVFYYKIVPRR 34
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,982,457
Number of Sequences: 1657284
Number of extensions: 13787450
Number of successful extensions: 35294
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 33461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35110
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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