Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24b15
         (359 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    25   1.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   6.1  
AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.    22   6.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   8.0  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +1

Query: 175 RAEALKRDESHVRVTPWANGRPAHLQKAVPK*RR 276
           R+   +R     R T W   RP    K +P+ RR
Sbjct: 272 RSPPARRRSRSTRPTSWPRSRPTSKPKRLPRRRR 305


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/25 (40%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
 Frame = +1

Query: 73   NINKMSAWRQAGLTYI---NYSNIA 138
            N+N ++ + Q GL+Y+   N SNI+
Sbjct: 3087 NLNTITCYEQHGLSYVFPHNTSNIS 3111


>AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -1

Query: 257 AFWRCAGRPLAQGVTLT*DSSRFNASARNSCFSDLRSTLAAM 132
           A+W  AG+P+ QG +   DS    A+  N  +   R+    M
Sbjct: 71  AYWADAGKPVQQGDSP--DSQNAYANCANEPYCAARTVQGYM 110


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
 Frame = +1

Query: 73   NINKMSAWRQAGLTYI---NYSNI 135
            N+N ++ + Q GL+Y+   N SNI
Sbjct: 3084 NLNTITCYEQHGLSYVFPHNTSNI 3107


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 347,641
Number of Sequences: 2352
Number of extensions: 5692
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26654730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)