Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24b07
         (599 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   3.4  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   4.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   6.0  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   7.9  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -2

Query: 97  NVPTYEPNVALESAQKIIQLQFSL 26
           N P Y  ++ +E +QK++ +  S+
Sbjct: 224 NAPLYASSIDVEGSQKLLNVDASI 247


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 378 TFYNITRTITTYF 340
           TF  I  TITTYF
Sbjct: 335 TFLGILATITTYF 347


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 580 IISFVALLKINVLHNH 533
           ++  +A+ K+NVLH H
Sbjct: 238 VVDGMAMAKLNVLHLH 253


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 228 AEFKFGAFSLISPTSFFFQDY 166
           A F FGAF+     SFF + Y
Sbjct: 13  AGFHFGAFTCEGCKSFFGRTY 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,252
Number of Sequences: 336
Number of extensions: 1518
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)