Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24b07
         (599 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione S-tran...    24   3.3  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   4.3  
AF316636-1|AAG45164.1|  221|Anopheles gambiae glutathione S-tran...    24   4.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   5.7  
AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding pr...    23   7.5  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   10.0 

>AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione
           S-transferase E3 protein.
          Length = 223

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = -2

Query: 262 QLSEHKLRNFEG*I*IWRLQFNLTDVFFFSRLLVEEKNWHSLMNKYHLLTLT 107
           Q + + L +FE  +   RL++ L  VF++ +  V ++   S+   Y LL  T
Sbjct: 94  QANINALLHFESGVLFARLRWILEPVFYWGQTEVPQEKIDSVHKAYDLLEAT 145


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 155 KKLAQSNEQVSPTNANLDLERS 90
           KK A+  +Q+   N NL+ ERS
Sbjct: 817 KKRAEFEQQIDRINNNLEFERS 838


>AF316636-1|AAG45164.1|  221|Anopheles gambiae glutathione
           S-transferase E2 protein.
          Length = 221

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = -2

Query: 238 NFEG*I*IWRLQFNLTDVFFFSRLLVEEKNWHSLMNKYHLL 116
           +FE  +   R++FN   + FF +  + E     +   Y LL
Sbjct: 101 HFESGVLFARMRFNFERILFFGKSDIPEDRVEYVQKSYELL 141


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -1

Query: 152  KLAQSNEQVSPTNANLDLERSDLRAERSSREC-TKNYSITIFTIYIKSA 9
            KL Q   ++  T+    L + D+RAER+ ++   K+ ++     YI+ A
Sbjct: 2532 KLLQRVSEIEMTDGRKILYQYDVRAERTFKQVRAKDETVLSEKYYIRDA 2580


>AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP12 protein.
          Length = 159

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 126 YLFIRLCQFFSSTNNLEKKKTSVRLN 203
           YL +  CQ  + TN+L ++   +R N
Sbjct: 134 YLILNQCQGNTITNSLNQQLNEIRCN 159


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 502 WFRREK*TFLCDYVKRLFLKVLQK 573
           W+R      +  +V+RLFL+++ K
Sbjct: 333 WYRSTSTHKMSPFVRRLFLEIMPK 356


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,294
Number of Sequences: 2352
Number of extensions: 6601
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)