Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24b04
         (501 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   3.3  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   3.3  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    23   4.4  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   7.7  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     23   7.7  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   7.7  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 139 HRHEHVLPFHNLHILNCGQCPWPQ 68
           H H H LP H  H  +  Q P PQ
Sbjct: 97  HPHHHQLPHHPHHQHHPQQQPSPQ 120


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 139 HRHEHVLPFHNLHILNCGQCPWPQ 68
           H H H LP H  H  +  Q P PQ
Sbjct: 97  HPHHHQLPHHPHHQHHPQQQPSPQ 120


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +3

Query: 261 TAVHALQDAQRGGAAKLVLRTRVAPVHRVGVEPAPRRP 374
           TAV    + + G   K V  T +A  H    EPAPR P
Sbjct: 475 TAVLVKYETKTGRLNKGVATTFLAEKHPNDGEPAPRVP 512


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 423 GHDAAVRRKEFVQDRPDY 476
           G+   V+R EF+ + PDY
Sbjct: 374 GYREFVKRVEFIDNSPDY 391


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 439 TAASWPHRNGPRRERN*TLPSLGR 368
           TAA  P +NG    +N +L  +GR
Sbjct: 432 TAAYSPQQNGVAERKNRSLTEMGR 455


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 336 VHRVGVEPAPRRPSDGKV*FRSRRGPFLCG 425
           +HR+G  P+P  P+ G     +    F+CG
Sbjct: 908 LHRMGYVPSPVCPACGDENQTAEHTIFICG 937


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,559
Number of Sequences: 2352
Number of extensions: 12903
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)