BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24b02
(690 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U92971-1|AAC51218.1| 374|Homo sapiens protease-activated recept... 35 0.31
BX537386-1|CAD97628.1| 376|Homo sapiens hypothetical protein pr... 35 0.31
BC093650-1|AAH93650.1| 374|Homo sapiens coagulation factor II (... 35 0.31
BC093648-1|AAH93648.1| 374|Homo sapiens coagulation factor II (... 35 0.31
AF374726-1|AAK51564.1| 374|Homo sapiens coagulation factor II r... 35 0.31
BC095499-1|AAH95499.1| 373|Homo sapiens F2RL2 protein protein. 34 0.42
BC111698-1|AAI11699.1| 607|Homo sapiens SGSM1 protein protein. 30 6.8
AL049759-1|CAI23393.1| 852|Homo sapiens protein ( Human DNA seq... 30 6.8
AB275761-1|BAF63511.1| 1093|Homo sapiens small G protein signali... 30 6.8
AB075821-1|BAB85527.1| 1233|Homo sapiens KIAA1941 protein protein. 30 6.8
>U92971-1|AAC51218.1| 374|Homo sapiens protease-activated receptor
3 protein.
Length = 374
Score = 34.7 bits (76), Expect = 0.31
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +3
Query: 183 FTCCTKYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYMATFNEFEYLQYWFLLSFLM 362
F+ +T + K+K P + S+++V T +GY+ + + + +LL F++
Sbjct: 53 FSALEGWTGATITVKIKCPEESASHLHVKNAT-----MGYLTSSLSTKLIPAIYLLVFVV 107
Query: 363 SVALNAPTLWTAFKTTEA--HEVVYEMKLFQAMYFSNVLSNYVVFSDNQMGTNFVF 524
V NA TLW F T + V Y F L + + N G N+VF
Sbjct: 108 GVPANAVTLWMLFFRTRSICTTVFYTNLAIADFLFCVTLPFKIAYHLN--GNNWVF 161
>BX537386-1|CAD97628.1| 376|Homo sapiens hypothetical protein
protein.
Length = 376
Score = 34.7 bits (76), Expect = 0.31
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +3
Query: 183 FTCCTKYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYMATFNEFEYLQYWFLLSFLM 362
F+ +T + K+K P + S+++V T +GY+ + + + +LL F++
Sbjct: 53 FSALEGWTGATITVKIKCPEESASHLHVKNAT-----MGYLTSSLSTKLIPAIYLLVFVV 107
Query: 363 SVALNAPTLWTAFKTTEA--HEVVYEMKLFQAMYFSNVLSNYVVFSDNQMGTNFVF 524
V NA TLW F T + V Y F L + + N G N+VF
Sbjct: 108 GVPANAVTLWMLFFRTRSICTTVFYTNLAIADFLFCVTLPFKIAYHLN--GNNWVF 161
>BC093650-1|AAH93650.1| 374|Homo sapiens coagulation factor II
(thrombin) receptor-like 2, precursor protein.
Length = 374
Score = 34.7 bits (76), Expect = 0.31
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +3
Query: 183 FTCCTKYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYMATFNEFEYLQYWFLLSFLM 362
F+ +T + K+K P + S+++V T +GY+ + + + +LL F++
Sbjct: 53 FSALEGWTGATITVKIKCPEESASHLHVKNAT-----MGYLTSSLSTKLIPAIYLLVFVV 107
Query: 363 SVALNAPTLWTAFKTTEA--HEVVYEMKLFQAMYFSNVLSNYVVFSDNQMGTNFVF 524
V NA TLW F T + V Y F L + + N G N+VF
Sbjct: 108 GVPANAVTLWMLFFRTRSICTTVFYTNLAIADFLFCVTLPFKIAYHLN--GNNWVF 161
>BC093648-1|AAH93648.1| 374|Homo sapiens coagulation factor II
(thrombin) receptor-like 2 protein.
Length = 374
Score = 34.7 bits (76), Expect = 0.31
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +3
Query: 183 FTCCTKYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYMATFNEFEYLQYWFLLSFLM 362
F+ +T + K+K P + S+++V T +GY+ + + + +LL F++
Sbjct: 53 FSALEGWTGATITVKIKCPEESASHLHVKNAT-----MGYLTSSLSTKLIPAIYLLVFVV 107
Query: 363 SVALNAPTLWTAFKTTEA--HEVVYEMKLFQAMYFSNVLSNYVVFSDNQMGTNFVF 524
V NA TLW F T + V Y F L + + N G N+VF
Sbjct: 108 GVPANAVTLWMLFFRTRSICTTVFYTNLAIADFLFCVTLPFKIAYHLN--GNNWVF 161
>AF374726-1|AAK51564.1| 374|Homo sapiens coagulation factor II
receptor-like 2 protein.
Length = 374
Score = 34.7 bits (76), Expect = 0.31
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +3
Query: 183 FTCCTKYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYMATFNEFEYLQYWFLLSFLM 362
F+ +T + K+K P + S+++V T +GY+ + + + +LL F++
Sbjct: 53 FSALEGWTGATITVKIKCPEESASHLHVKNAT-----MGYLTSSLSTKLIPAIYLLVFVV 107
Query: 363 SVALNAPTLWTAFKTTEA--HEVVYEMKLFQAMYFSNVLSNYVVFSDNQMGTNFVF 524
V NA TLW F T + V Y F L + + N G N+VF
Sbjct: 108 GVPANAVTLWMLFFRTRSICTTVFYTNLAIADFLFCVTLPFKIAYHLN--GNNWVF 161
>BC095499-1|AAH95499.1| 373|Homo sapiens F2RL2 protein protein.
Length = 373
Score = 34.3 bits (75), Expect = 0.42
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +3
Query: 183 FTCCTKYTRLSTDTKVKFPYAALSYINVTLCTYTAMLVGYMATFNEFEYLQYWFLLSFLM 362
F+ +T + K+K P + S+++V T +GY+ + + + +LL F++
Sbjct: 52 FSALEGWTGATITVKIKCPGESASHLHVKNAT-----MGYLTSSLSTKLIPAIYLLVFVV 106
Query: 363 SVALNAPTLWTAFKTTEA--HEVVYEMKLFQAMYFSNVLSNYVVFSDNQMGTNFVF 524
V NA TLW F T + V Y F L + + N G N+VF
Sbjct: 107 GVPANAVTLWMLFFRTRSICTTVFYTNLAIADFLFCVTLPFKIAYHLN--GNNWVF 160
>BC111698-1|AAI11699.1| 607|Homo sapiens SGSM1 protein protein.
Length = 607
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Frame = +3
Query: 312 FNEFEYLQYWFLLSFLMS-----VALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLS 476
+ F + WFLL F V L T+W A + AH V++ +Y +L
Sbjct: 506 YTHFYFCYRWFLLDFKRELVYDDVFLVWETIWAAKHVSSAHYVLFIALALVEVYRDIILE 565
Query: 477 NYVVFSD 497
N + F+D
Sbjct: 566 NNMDFTD 572
>AL049759-1|CAI23393.1| 852|Homo sapiens protein ( Human DNA
sequence from clone RP5-930L11 on chromosome
22q11.21-11.23. ).
Length = 852
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Frame = +3
Query: 312 FNEFEYLQYWFLLSFLMS-----VALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLS 476
+ F + WFLL F V L T+W A + AH V++ +Y +L
Sbjct: 751 YTHFYFCYRWFLLDFKRELVYDDVFLVWETIWAAKHVSSAHYVLFIALALVEVYRDIILE 810
Query: 477 NYVVFSD 497
N + F+D
Sbjct: 811 NNMDFTD 817
>AB275761-1|BAF63511.1| 1093|Homo sapiens small G protein signaling
modulator 1 protein protein.
Length = 1093
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Frame = +3
Query: 312 FNEFEYLQYWFLLSFLMS-----VALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLS 476
+ F + WFLL F V L T+W A + AH V++ +Y +L
Sbjct: 992 YTHFYFCYRWFLLDFKRELVYDDVFLVWETIWAAKHVSSAHYVLFIALALVEVYRDIILE 1051
Query: 477 NYVVFSD 497
N + F+D
Sbjct: 1052 NNMDFTD 1058
>AB075821-1|BAB85527.1| 1233|Homo sapiens KIAA1941 protein protein.
Length = 1233
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Frame = +3
Query: 312 FNEFEYLQYWFLLSFLMS-----VALNAPTLWTAFKTTEAHEVVYEMKLFQAMYFSNVLS 476
+ F + WFLL F V L T+W A + AH V++ +Y +L
Sbjct: 1132 YTHFYFCYRWFLLDFKRELVYDDVFLVWETIWAAKHVSSAHYVLFIALALVEVYRDIILE 1191
Query: 477 NYVVFSD 497
N + F+D
Sbjct: 1192 NNMDFTD 1198
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,567,463
Number of Sequences: 237096
Number of extensions: 2054971
Number of successful extensions: 4158
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4147
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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