Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24a22
         (640 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Y0J7 Cluster: Putative uncharacterized protein; n=1; ...    37   0.36 
UniRef50_A5KAC8 Cluster: DegP-like serine protease 1, putative; ...    33   4.4  
UniRef50_UPI00005884E2 Cluster: PREDICTED: similar to Rp2-prov p...    33   5.8  
UniRef50_A4VD04 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_Q4UEN0 Cluster: Putative uncharacterized protein; n=2; ...    33   7.7  

>UniRef50_Q4Y0J7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 221

 Score = 37.1 bits (82), Expect = 0.36
 Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = -3

Query: 368 FLLLTIVKK*KRQIETSKVTYDRTICYINSLITLFQKLKT-V*CFIKKATLLTISYICTY 192
           F++++ +KK K+ +      Y  T  + N+ + + +K+ T +  F KK + +  SY+C Y
Sbjct: 4   FIVISFLKKNKKILFICPYFYF-TFIFQNTTVHIHEKIYTLITYFYKKISFIKRSYLCCY 62

Query: 191 ILLLINEELFHYYKYF*TIF 132
           I +L    L++++ +F ++F
Sbjct: 63  IWVL-EFSLYYFFSFFFSLF 81


>UniRef50_A5KAC8 Cluster: DegP-like serine protease 1, putative;
           n=1; Plasmodium vivax|Rep: DegP-like serine protease 1,
           putative - Plasmodium vivax
          Length = 809

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 249 CFQLLKQSNKTIYITDCTIIRHF 317
           CFQLLK +N T YI    +I+HF
Sbjct: 380 CFQLLKMANNTSYIIPTPVIKHF 402


>UniRef50_UPI00005884E2 Cluster: PREDICTED: similar to Rp2-prov
           protein; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to Rp2-prov protein -
           Strongylocentrotus purpuratus
          Length = 345

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 21/57 (36%), Positives = 28/57 (49%)
 Frame = +3

Query: 204 IRNCKQCCFFNKTLYCFQLLKQSNKTIYITDCTIIRHFACFNLSFLFLDNC*K*KCL 374
           I+NC+ C     T+Y F  +     TI + DCT  R F   N   +FL NC   KC+
Sbjct: 59  IKNCEDC-----TIYLFDHMA----TITVDDCTNCRIFVGPNKGSIFLRNCKSMKCV 106


>UniRef50_A4VD04 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 261

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 20/71 (28%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = +1

Query: 172 SLINRSMYVHIYEIVSN-VAFLIKHYTVFSF*NRVIRLFI*QIVRSYVTLLVSICLFYFL 348
           SL++  +Y+H   I+S+ + F++  Y +F+F + ++R  I QI  S V + +++  FY+L
Sbjct: 101 SLLSLFIYIHRLAILSDLIRFVV--YFLFNFFSFLLRHLILQIDFSQVLIHLAVFFFYYL 158

Query: 349 TIVKSKNVYDV 381
            ++ + N + +
Sbjct: 159 FLI-TNNYFQI 168


>UniRef50_Q4UEN0 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 173

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 17/65 (26%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
 Frame = +1

Query: 175 LINRSMYVHIYEIVSNVA-FLIKHYTVFSF*NRVIRLFI*QIVRSYVTLLVSICLFYFLT 351
           L++  +++++  I +++A F++   T+F   N  + L I  ++   +TL  ++CL   +T
Sbjct: 31  LLSSGLHIYLSNIGNSIANFILGFLTIFFIFNPSVVLII-SLMTYSITLSSTLCLLLVIT 89

Query: 352 IVKSK 366
           I+K K
Sbjct: 90  IIKQK 94


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,273,934
Number of Sequences: 1657284
Number of extensions: 9048660
Number of successful extensions: 17773
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17745
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)