Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc24a09
(671 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8SZ89 Cluster: RE13149p; n=8; Bilateria|Rep: RE13149p ... 179 5e-44
UniRef50_UPI00015B525F Cluster: PREDICTED: similar to ENSANGP000... 146 3e-34
UniRef50_Q13889 Cluster: TFIIH basal transcription factor comple... 98 2e-19
UniRef50_O74366 Cluster: RNA polymerase II transcription factor ... 65 2e-09
UniRef50_UPI00005A4869 Cluster: PREDICTED: similar to general tr... 58 1e-07
UniRef50_Q552R3 Cluster: General transcription factor IIH, polyp... 58 3e-07
UniRef50_A7SG25 Cluster: Predicted protein; n=1; Nematostella ve... 40 1e-06
UniRef50_A4RQX7 Cluster: Predicted protein; n=1; Ostreococcus lu... 52 1e-05
UniRef50_Q12004 Cluster: RNA polymerase II transcription factor ... 52 1e-05
UniRef50_Q3KZ74 Cluster: SJCHGC03528 protein; n=1; Schistosoma j... 51 2e-05
UniRef50_A4R4C6 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_Q6CD24 Cluster: RNA polymerase II transcription factor ... 47 4e-04
UniRef50_Q0UMQ4 Cluster: Putative uncharacterized protein; n=3; ... 47 5e-04
UniRef50_Q4WVC2 Cluster: Transcription factor TFIIH subunit Tfb4... 45 0.001
UniRef50_UPI000023F12B Cluster: hypothetical protein FG10862.1; ... 44 0.003
UniRef50_A6QTZ0 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_Q01GM2 Cluster: Basal transcription factor complex subu... 42 0.010
UniRef50_Q9P5Y6 Cluster: Related to basic transcription factor 2... 42 0.010
UniRef50_Q4PG41 Cluster: Putative uncharacterized protein; n=1; ... 42 0.014
UniRef50_Q2GPB6 Cluster: Putative uncharacterized protein; n=1; ... 42 0.014
UniRef50_A7NVC0 Cluster: Chromosome chr18 scaffold_1, whole geno... 41 0.031
UniRef50_A5E525 Cluster: Putative uncharacterized protein; n=1; ... 38 0.22
UniRef50_A5DKJ5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.22
UniRef50_Q6BL86 Cluster: RNA polymerase II transcription factor ... 38 0.29
UniRef50_Q684A9 Cluster: Nucleoside-diphosphate-sugar epimerase;... 35 1.6
UniRef50_A6EGU1 Cluster: Cysteine desulfurase; n=1; Pedobacter s... 34 3.6
UniRef50_A7B3K6 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_A7F9X7 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 4.8
>UniRef50_Q8SZ89 Cluster: RE13149p; n=8; Bilateria|Rep: RE13149p -
Drosophila melanogaster (Fruit fly)
Length = 299
Score = 179 bits (436), Expect = 5e-44
Identities = 78/164 (47%), Positives = 118/164 (71%)
Frame = +1
Query: 178 TNPNQRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPGKPLD 357
TNP+Q ++ ++P+ LT +L+AV+AF N+HLMQKA N+LAV+ C H + +LYP P + ++
Sbjct: 24 TNPSQHFVRQNPQNLTQILEAVIAFGNAHLMQKAQNKLAVVSCSHHATNFLYPLPRRQVE 83
Query: 358 VRQIDGQYELFTLVEKTIKMRLVNLIKSQPQEEKPGESXXXXXXXXXXCFIARSRRSAIP 537
+RQ+DGQYE F LVEKT+K +L +++ + P+ P ES C+I+R +R+ P
Sbjct: 84 LRQVDGQYEAFNLVEKTVKQQLGSILMNAPRLSAPCESLLAGSMSMALCYISRLQRNLAP 143
Query: 538 GLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVD 669
G++ SRILVVTGS + A+QY+ ++NVFFTAQK + ID C++D
Sbjct: 144 GVKMHSRILVVTGSNECASQYMTFLNVFFTAQKLGITIDTCALD 187
>UniRef50_UPI00015B525F Cluster: PREDICTED: similar to
ENSANGP00000011127; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000011127 - Nasonia
vitripennis
Length = 296
Score = 146 bits (355), Expect = 3e-34
Identities = 72/164 (43%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
Frame = +1
Query: 181 NPNQRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPGKPLDV 360
NP Q+ + ++LT LD+ + FSN+HLMQ A N LA++ CH +++LYP P DV
Sbjct: 18 NPMQKLV---KQVLTQCLDSTIVFSNAHLMQTAGNSLAIMACHSQGAQFLYPQEKMP-DV 73
Query: 361 RQIDGQYELFTLVEKTIKMRLVNLIKSQPQEEKPGE-SXXXXXXXXXXCFIARSRRSAIP 537
RQ DGQYE FT +E+T++ ++ ++ + K E S C+IAR R
Sbjct: 74 RQFDGQYEKFTQLERTVRQQIHEMVGEMSMDRKGNEESLISGALSMALCYIARMEREKYA 133
Query: 538 GLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVD 669
G RILV+T S D+A QY+NYMN+FFTAQK V++DVCS+D
Sbjct: 134 GEHLHPRILVITASHDSATQYMNYMNIFFTAQKMGVMLDVCSLD 177
>UniRef50_Q13889 Cluster: TFIIH basal transcription factor complex
p34 subunit; n=29; Deuterostomia|Rep: TFIIH basal
transcription factor complex p34 subunit - Homo sapiens
(Human)
Length = 308
Score = 97.9 bits (233), Expect = 2e-19
Identities = 56/164 (34%), Positives = 81/164 (49%), Gaps = 14/164 (8%)
Frame = +1
Query: 220 LTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPS-----------PGKPLDVRQ 366
L+ +DAV+ NSHL SN+LAVI H +S +LYP PG P +
Sbjct: 34 LSKCIDAVMVLGNSHLFMNRSNKLAVIASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNP 93
Query: 367 I---DGQYELFTLVEKTIKMRLVNLIKSQPQEEKPGESXXXXXXXXXXCFIARSRRSAIP 537
DG+YEL T + I + +L+ + + E+ C+I R +
Sbjct: 94 SGSKDGKYELLTSANEVIVEEIKDLMTKSDIKGQHTETLLAGSLAKALCYIHRMNKEVKD 153
Query: 538 GLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVD 669
SRILV+ + D+A QY+N+MNV F AQK+ +LID C +D
Sbjct: 154 NQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVLD 197
>UniRef50_O74366 Cluster: RNA polymerase II transcription factor B
subunit 4; n=1; Schizosaccharomyces pombe|Rep: RNA
polymerase II transcription factor B subunit 4 -
Schizosaccharomyces pombe (Fission yeast)
Length = 297
Score = 64.9 bits (151), Expect = 2e-09
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Frame = +1
Query: 181 NPNQRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPGKPLDV 360
NP Y + ++ VL + F N+HL N +AV+ H K EYLYPS V
Sbjct: 33 NPASWYSLSKKVPVSKVLADITVFLNAHLAFHHDNRVAVLASHSDKVEYLYPSIAPEQKV 92
Query: 361 RQID-----GQYELFTLVEKTIKMRLVNLIKSQPQEEKPGESXXXXXXXXXXCFIARSRR 525
++D Y F V+ + + L+ S + + ++ +I + +
Sbjct: 93 AEVDPTKEANTYRKFREVDDLVLSGMKRLMSSTDKVSR--KTMISGALSRALAYINQVQN 150
Query: 526 SAIPGLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVD 669
LR SRIL+ + + D A QYI MN F AQK+ + I+VC+++
Sbjct: 151 KNT--LR--SRILIFSLTGDVALQYIPTMNCIFCAQKKNIPINVCNIE 194
>UniRef50_UPI00005A4869 Cluster: PREDICTED: similar to general
transcription factor IIH, polypeptide 3, 34kDa isoform
3; n=3; Eutheria|Rep: PREDICTED: similar to general
transcription factor IIH, polypeptide 3, 34kDa isoform 3
- Canis familiaris
Length = 265
Score = 58.4 bits (135), Expect = 1e-07
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 19/152 (12%)
Frame = +1
Query: 178 TNP---NQRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYP---- 336
TNP ++ + E L+ +DAV+ NSHL SN+LAVI H +S +LYP
Sbjct: 17 TNPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASHIQESRFLYPGKNG 76
Query: 337 -------SPGKPLDVR---QIDGQYELFTLVEKTIKMRLVNLIKSQPQEEKPGESXXXXX 486
PG P + DG+YELFT + I + +L+ + + E+
Sbjct: 77 KLGDFFGDPGNPSEFSPSGSKDGKYELFTAANEVIVEEIKDLMIKSDIKGQHTETLLAGS 136
Query: 487 XXXXXCFIARSRRSAIPGLRTSSRILV--VTG 576
C+I R + SRIL +TG
Sbjct: 137 LAKALCYIHRMNKEVKDNQEMKSRILACDITG 168
>UniRef50_Q552R3 Cluster: General transcription factor IIH,
polypeptide 3; n=2; Dictyostelium discoideum|Rep:
General transcription factor IIH, polypeptide 3 -
Dictyostelium discoideum AX4
Length = 372
Score = 57.6 bits (133), Expect = 3e-07
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Frame = +1
Query: 232 LDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPG--------KPLDVRQIDGQYEL 387
L+ + F N++LM N+LA+I +S +++P + L+ RQ++ EL
Sbjct: 96 LEHFMVFINAYLMLNQENQLAIICSKIGESSFVFPQSNIDQYQQEQQELEQRQLNENGEL 155
Query: 388 FTLVEKTIKMRLVNLIKSQPQEEKPGE-----SXXXXXXXXXXCFIARSRRSAIPGLRTS 552
KTI+ +++ ++ E K + S C+I R +R P ++
Sbjct: 156 LPTPNKTIQGQILAKLQKLDLEIKHDQTDILSSSFSASMSIALCYINRIKRET-PTIKP- 213
Query: 553 SRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVC 660
RILV S D ++QYI+ MN F++QK+ + +D C
Sbjct: 214 -RILVFNISPDVSSQYISVMNCIFSSQKQSIPVDSC 248
>UniRef50_A7SG25 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 190
Score = 39.5 bits (88), Expect(2) = 1e-06
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 538 GLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVC 660
G + RIL++ S D A+ Y+ MN F AQK ID C
Sbjct: 116 GAKLQPRILIIKASPDDASHYMPVMNSIFAAQKSNTCIDAC 156
Score = 35.5 bits (78), Expect(2) = 1e-06
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 220 LTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPGKP--LDVRQIDGQYELFT 393
LT L++++ NS+L+ K +N LA + + S++LYP + D +YE F+
Sbjct: 35 LTRCLESLMVLCNSYLLLKHNNLLAFVAASTNGSKFLYPKASCEGIQSLPSQDSKYEKFS 94
Query: 394 LVEKTIKMRLVNLI 435
T+ + L+
Sbjct: 95 EFNDTVLREIKKLV 108
>UniRef50_A4RQX7 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 285
Score = 52.4 bits (120), Expect = 1e-05
Identities = 43/146 (29%), Positives = 58/146 (39%), Gaps = 1/146 (0%)
Frame = +1
Query: 220 LTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPGKPLDVRQIDGQYELFTLV 399
L++VL+A F NS N AVI H YLY SP L++ D
Sbjct: 42 LSSVLEATTVFLNSFFALNQQNRAAVIAVHDDGCHYLYTSP---LELNAGDAS------A 92
Query: 400 EKTIKMRLVNLIKSQPQEEKPGESXXXXXXXXXXCFIARSRR-SAIPGLRTSSRILVVTG 576
T K R + P S C+ R++ GLR RIL +
Sbjct: 93 SATGKKRTKT---ATPSSRAAMSSPFAGALSLALCYCNRAQTLETAAGLRVRPRILCLQA 149
Query: 577 SADTAAQYINYMNVFFTAQKEQVLID 654
S D YI+ MN F+AQ++ + ID
Sbjct: 150 SQDNPTDYISMMNAIFSAQRQSIPID 175
>UniRef50_Q12004 Cluster: RNA polymerase II transcription factor B
subunit 4; n=5; Saccharomycetales|Rep: RNA polymerase II
transcription factor B subunit 4 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 338
Score = 52.0 bits (119), Expect = 1e-05
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Frame = +1
Query: 220 LTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPGKPL-----------DVRQ 366
+ VL+A++ F N+HL ++N++AVI + +YLYP L D++
Sbjct: 50 IIKVLEALIVFLNAHLAFNSANKVAVIAAYSQGIKYLYPESTSALKASESENKTRSDLKI 109
Query: 367 IDG-QYELFTLVEKTIKMRLVNLIKSQPQ--EEKPGESXXXXXXXXXXCFIAR-SRRSAI 534
I+ Y F V++T+ + L + + + E+ S ++ R S+ S
Sbjct: 110 INSDMYRRFRNVDETLVEEIYKLFELEKKQIEQNSQRSTLAGAMSAGLTYVNRISKESVT 169
Query: 535 PGLRTSSRILVVT----GSADTAAQYINYMNVFFTAQKEQVLIDVCSV 666
L+ SR+LV+T S D QYI MN F+A K + IDV +
Sbjct: 170 TSLK--SRLLVLTCGSGSSKDEIFQYIPIMNCIFSATKMKCPIDVVKI 215
>UniRef50_Q3KZ74 Cluster: SJCHGC03528 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03528 protein - Schistosoma
japonicum (Blood fluke)
Length = 131
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/74 (32%), Positives = 44/74 (59%)
Frame = +1
Query: 220 LTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPGKPLDVRQIDGQYELFTLV 399
L N ++A + F+NSHLM + NE+AVIG + +++YP+ + L DGQ + + +
Sbjct: 29 LPNCIEAALGFANSHLMLSSFNEVAVIGVTPSQIKFIYPNHSETLVGASNDGQNDALSCM 88
Query: 400 EKTIKMRLVNLIKS 441
T++ ++L+ S
Sbjct: 89 NNTVRQLSLDLVTS 102
>UniRef50_A4R4C6 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 380
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +1
Query: 178 TNPNQRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPGKP 351
TNP ++ D ++ + ++ F N+HL +S+ +AVI H H++ +LYPSP KP
Sbjct: 28 TNPRAWALLRDVLPISKAIANILVFVNAHLALSSSHSVAVIAAHTHRAVWLYPSPPKP 85
>UniRef50_Q6CD24 Cluster: RNA polymerase II transcription factor B
subunit 4; n=1; Yarrowia lipolytica|Rep: RNA polymerase
II transcription factor B subunit 4 - Yarrowia
lipolytica (Candida lipolytica)
Length = 340
Score = 47.2 bits (107), Expect = 4e-04
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 23/172 (13%)
Frame = +1
Query: 220 LTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYP--------------------S 339
++ + +++ F N+HL SN + VIG + + LYP S
Sbjct: 46 ISEAVASILVFINAHLALHNSNSVNVIGYNASGARILYPPKSGVESTRSKEREERSESVS 105
Query: 340 PGKPLDVRQIDGQYELFTLVEKTIKMRLVNLIK--SQPQEEKPGESXXXXXXXXXXCFIA 513
G+ ++ Y F V++ ++ L N++ + +EEK S FI
Sbjct: 106 DGEQAPSKKDHSMYRQFKTVDEVVQTELWNMLNHTNYVEEEKQHNSAISGALSLALGFI- 164
Query: 514 RSRRSAIPGLRTSSRILVVT-GSADTAAQYINYMNVFFTAQKEQVLIDVCSV 666
++ + R +RIL++T G + QYI MN F AQK ++ +DVC +
Sbjct: 165 -NKHVFVDESRMRARILLLTVGHKNETIQYIPTMNCIFAAQKLKIPVDVCKL 215
>UniRef50_Q0UMQ4 Cluster: Putative uncharacterized protein; n=3;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 422
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +1
Query: 178 TNPNQRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPGKP 351
TNP+ + L+ L ++ F N+HL +NE+ VI H HK+ +LYP+P P
Sbjct: 28 TNPHAWAHLSSSISLSAALANILVFINAHLASGNANEVCVIASHSHKATFLYPTPNPP 85
Score = 39.5 bits (88), Expect = 0.072
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +1
Query: 550 SSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDV 657
+SRIL+V+ S D A QYI MN F AQ++++ ID+
Sbjct: 198 TSRILIVSVSGDLANQYIPVMNSIFAAQRKKIPIDI 233
>UniRef50_Q4WVC2 Cluster: Transcription factor TFIIH subunit Tfb4,
putative; n=8; Eurotiomycetidae|Rep: Transcription
factor TFIIH subunit Tfb4, putative - Aspergillus
fumigatus (Sartorya fumigata)
Length = 387
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +1
Query: 178 TNPNQRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPGK 348
TNP+ ++ED L+ + ++ F N+HL +NE+AV+ H K+ +LYP K
Sbjct: 28 TNPHAWALLEDSLPLSTAIANILVFVNAHLACNYANEVAVVASHSQKATWLYPCETK 84
Score = 41.1 bits (92), Expect = 0.024
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 538 GLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSV 666
GL++ I+ V+GS D+A QYI MN F Q+ + IDVC +
Sbjct: 208 GLQSRILIISVSGSTDSAHQYIPIMNCIFACQRLHIPIDVCKL 250
>UniRef50_UPI000023F12B Cluster: hypothetical protein FG10862.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10862.1 - Gibberella zeae PH-1
Length = 355
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +1
Query: 178 TNPNQRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPGKPLD 357
TNP + L+ + ++ F N+HL +N +A+I H ++E+LYP+P KP
Sbjct: 28 TNPRAWASLNSLLPLSRAIANILVFVNAHLAFSNANRVALIAAHVDRAEWLYPTPPKP-- 85
Query: 358 VRQIDGQYEL 387
R G E+
Sbjct: 86 SRDASGDVEM 95
>UniRef50_A6QTZ0 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 413
Score = 43.6 bits (98), Expect = 0.004
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +1
Query: 178 TNPNQRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPGKP 351
TNP+ +E L+ + ++ F N+HL +N++AV+ H H + +LYP+P P
Sbjct: 28 TNPHAWARLEPSLPLSAAIANLLVFINAHLACNYANKVAVVASHCHHAAWLYPTPASP 85
>UniRef50_Q01GM2 Cluster: Basal transcription factor complex
subunit-related; n=1; Ostreococcus tauri|Rep: Basal
transcription factor complex subunit-related -
Ostreococcus tauri
Length = 319
Score = 42.3 bits (95), Expect = 0.010
Identities = 43/171 (25%), Positives = 65/171 (38%), Gaps = 26/171 (15%)
Frame = +1
Query: 220 LTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSP-GKPLD-----------VR 363
L++VL A + F N+ N V+ H YLY SP G D
Sbjct: 43 LSSVLGATITFLNAFFALNQQNRAVVVAVHGDGCHYLYTSPLGVETDEDGDEAEDARWAN 102
Query: 364 QIDGQYELFTLVEKTIKMRLVNLIKSQP-------------QEEKPGESXXXXXXXXXXC 504
++ G L + TI RL L ++ ++ P S C
Sbjct: 103 KVGGLDPLQSEAGPTILRRLGELNAAETGSSATGAKRDKADSDDGPATSPFAGALSLALC 162
Query: 505 FIARSRR-SAIPGLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVLID 654
+ R++ GLR+ RIL + S D YI MN F+AQ++ + +D
Sbjct: 163 YCNRAQALENAAGLRSKPRILCLQASQDNPTDYIPMMNAIFSAQRQSIPVD 213
>UniRef50_Q9P5Y6 Cluster: Related to basic transcription factor 2;
n=1; Neurospora crassa|Rep: Related to basic
transcription factor 2 - Neurospora crassa
Length = 439
Score = 42.3 bits (95), Expect = 0.010
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +1
Query: 178 TNPNQRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPS 339
TNP + D LT L ++ F NSHL SN++A+I H +++ +LYP+
Sbjct: 31 TNPRAWAALNDVLPLTKALANILIFVNSHLAFNNSNQVALIASHTNRAVWLYPT 84
>UniRef50_Q4PG41 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 422
Score = 41.9 bits (94), Expect = 0.014
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +1
Query: 553 SRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSV 666
SRIL+++ + D + QYI MN F AQK+ + IDVC +
Sbjct: 252 SRILILSVTQDASTQYIPMMNCIFAAQKKGITIDVCKL 289
>UniRef50_Q2GPB6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 408
Score = 41.9 bits (94), Expect = 0.014
Identities = 18/67 (26%), Positives = 37/67 (55%)
Frame = +1
Query: 178 TNPNQRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPGKPLD 357
TNP + D ++ + ++ F N+HL SN++++I H +++ +LYP+P +
Sbjct: 31 TNPRAWAALTDVLPISKAIANILVFVNAHLAFSNSNQVSIIAAHTNRAVWLYPAPPRQGR 90
Query: 358 VRQIDGQ 378
+ +D Q
Sbjct: 91 SQDVDMQ 97
>UniRef50_A7NVC0 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=3; Magnoliophyta|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 211
Score = 40.7 bits (91), Expect = 0.031
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +1
Query: 502 CFIARSRRSAIPGLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSV 666
C+I R R+ L RIL + GS D QY+ MN F+AQ+ V ID C +
Sbjct: 45 CYIQRVFRTG--PLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPIDSCVI 97
>UniRef50_A5E525 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 444
Score = 37.9 bits (84), Expect = 0.22
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 526 SAIPGLRTSSRILVVTGSA-DTAAQYINYMNVFFTAQKEQVLIDVCSV 666
S+ + +SRIL+VT S D YI MN FTAQK +V IDV +
Sbjct: 249 SSTSSVSMNSRILIVTASDNDNHLNYIPLMNCIFTAQKLKVSIDVAKL 296
Score = 35.9 bits (79), Expect = 0.89
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Frame = +1
Query: 196 YIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPGKPLDVRQI-- 369
Y + L N+ +++ F N HL SN++A I S++LYP K +Q
Sbjct: 38 YNLRHTTSLENITKSLLVFLNGHLALNNSNQVAFIASSSTGSKFLYPHLAKSNTEKQTRA 97
Query: 370 ----DGQYELFTLVEKTIKMRLVNLIKSQPQ 450
G Y F V + + L+ + + +
Sbjct: 98 DRISQGMYRQFKNVNEVVLEELIRFVNEEAE 128
>UniRef50_A5DKJ5 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 378
Score = 37.9 bits (84), Expect = 0.22
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = +1
Query: 181 NPNQRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYP---SPGKP 351
NP Y I + + V +++ F N+HL SN +A + + +LYP S K
Sbjct: 54 NPLGWYNIRNRTTVKEVTKSLIVFMNAHLSLNNSNRVAFLTASPSGARFLYPNTMSDQKD 113
Query: 352 LDVRQID-GQYELFTLVEKTIKMRLVNLIKSQPQEE 456
++ G Y F +V++T+ + L N ++ Q E
Sbjct: 114 TANTLVNRGMYRQFRIVDETVLLELNNEFQAVAQSE 149
Score = 33.1 bits (72), Expect = 6.3
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 553 SRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDV 657
SRILVV+ + +YI MN F AQK +V IDV
Sbjct: 214 SRILVVSPDDNDDIRYIPIMNSIFAAQKMKVSIDV 248
>UniRef50_Q6BL86 Cluster: RNA polymerase II transcription factor B
subunit 4; n=3; Saccharomycetales|Rep: RNA polymerase II
transcription factor B subunit 4 - Debaryomyces hansenii
(Yeast) (Torulaspora hansenii)
Length = 387
Score = 37.5 bits (83), Expect = 0.29
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +1
Query: 184 PNQRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPGKPLD 357
P Y I + + V +++ F N+HL SN++A I S++LYP+P K D
Sbjct: 33 PQSWYKIRNQITIQEVAKSLLVFLNAHLSLNNSNQVAFIASTPQGSKFLYPNPEKNYD 90
Score = 36.3 bits (80), Expect = 0.67
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +1
Query: 553 SRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSV 666
SRIL+V+ + D +YI MN F AQK +V IDV +
Sbjct: 217 SRILIVSSNDDNDIKYIPIMNTTFAAQKMKVPIDVAKL 254
>UniRef50_Q684A9 Cluster: Nucleoside-diphosphate-sugar epimerase;
n=1; Sulfolobus virus STSV1|Rep:
Nucleoside-diphosphate-sugar epimerase - Sulfolobus
virus STSV1
Length = 320
Score = 35.1 bits (77), Expect = 1.6
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Frame = +1
Query: 193 RYIIEDPKMLTNVLDAV-VAFSNSHLMQKASNELAVIGC--HFHKSEYLYPSPGKPLDVR 363
R ED + N + A +A + + L+ ++ E+ H++K E +Y +P P V
Sbjct: 77 RLSYEDTSFMNNAIIAYNIAMAEAPLIHASTAEVYPYTPYPHYYKEEEVYRTPTSPYAVS 136
Query: 364 QIDGQYELFTLVEKTIKMRLVNLIKSQPQEEKPGESXXXXXXXXXXCFIARSRRSAIPGL 543
+I + L EKTI +R +N I +P P E+ ++ ++ G
Sbjct: 137 KIASEMLLAGRKEKTIILRPINTI-GRPISRLPEEARGYFFEKTVLAMLSGAKEIHYDGH 195
Query: 544 RTSSR 558
SSR
Sbjct: 196 PLSSR 200
>UniRef50_A6EGU1 Cluster: Cysteine desulfurase; n=1; Pedobacter sp.
BAL39|Rep: Cysteine desulfurase - Pedobacter sp. BAL39
Length = 382
Score = 33.9 bits (74), Expect = 3.6
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 237 IQDVCEHFGVLYYVSLIGIGVHYYHEETAVRGHIVVC 127
I D+CE + +Y+ + HY H+ ++ H +VC
Sbjct: 163 IGDLCEQYDAIYHSDTVQTMGHYVHDVRKLKAHFIVC 199
>UniRef50_A7B3K6 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 302
Score = 33.5 bits (73), Expect = 4.8
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = -3
Query: 264 MGVTKCYYSIQDVCEHFGVLYYV-SLIGIGVH--YYHEETAVRGHIVVCHC 121
M V C Y++ D+ +HFGV Y + + IG G++ + +E GH HC
Sbjct: 36 MMVGGCAYNVADILKHFGVNYTLFAPIGTGMYADFIRKELKKAGHESPVHC 86
>UniRef50_A7F9X7 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 391
Score = 33.5 bits (73), Expect = 4.8
Identities = 25/101 (24%), Positives = 47/101 (46%)
Frame = -1
Query: 305 QPITASSLLAFCIKWELLNATTASKTFVSILGSSIMYL*LGLVSTITTRRLLSEGTSSSA 126
+P T S+ + +T+ S T +S + SS ++ + T+ + S G+ SS
Sbjct: 135 KPSTTSTSSKSSVSSSSSISTSTSSTSISKVSSSKIFSTSSTSVSSTSSSVKSTGSLSSG 194
Query: 125 IAND*VT*SEYFNLNSN*KSTIDVLKISCKIFNTISPICYF 3
I + ++ S + S+ T + SC + NT++ I YF
Sbjct: 195 IRSSSISGSG--TITSSSSLTSSIASFSCSVSNTVTDITYF 233
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,733,314
Number of Sequences: 1657284
Number of extensions: 12603269
Number of successful extensions: 30373
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 29530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30357
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -