Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24a09
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   1.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   2.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   5.3  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   5.3  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   5.3  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.2  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -3

Query: 243 YSIQDVCEHFGVLYYVSLIGIGVHYYH 163
           Y+  D+ E   + Y+   +GI +H++H
Sbjct: 183 YTASDLEEEHRLAYFREDLGINLHHWH 209


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -3

Query: 243 YSIQDVCEHFGVLYYVSLIGIGVHYYH 163
           ++  D+ E   V Y+   IG+ +H++H
Sbjct: 183 FTASDLDEEHRVAYWREDIGLNLHHWH 209


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = +1

Query: 208  DPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPG 345
            DP + T++        +S +  K  +  A I   F+K    Y S G
Sbjct: 2346 DPSLCTHINYGFAVLDSSSMTLKPHDSWADIDNEFYKKVVSYKSRG 2391


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 139 HRRLPLLTIKSHEVSTLI*IVIK 71
           H  + ++T+K H+ STL  I++K
Sbjct: 82  HVFVTMMTLKRHKWSTLFEILLK 104


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +3

Query: 102 SCDLIVSNGRRRCAL*QQSPRGNSGHQSQSKIHNRGPQNAHKR 230
           SC +I    R +C   +     N G    +  H RGP+N+  R
Sbjct: 81  SC-IIDKTHRNQCRACRLKKCQNVGMNKDAVQHERGPRNSTLR 122


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +3

Query: 102 SCDLIVSNGRRRCAL*QQSPRGNSGHQSQSKIHNRGPQNAHKR 230
           SC +I    R +C   +     N G    +  H RGP+N+  R
Sbjct: 81  SC-IIDKTHRNQCRACRLKKCQNVGMNKDAVQHERGPRNSTLR 122


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 391 TLVEKTIKMRLVNLIKSQPQEEK 459
           T V+KT    L+N+ K+  QE +
Sbjct: 232 TFVDKTASDYLINVFKTTLQERE 254


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 417 EISQFNQKSTARRETRRVIAGRRFGTGTLF 506
           E+S  +   + +    RV  G+RF  G +F
Sbjct: 421 EVSDCDSSESRKEVYVRVPLGQRFSNGEIF 450


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,651
Number of Sequences: 336
Number of extensions: 3319
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)