Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc24a02
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   0.62 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   7.6  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -2

Query: 488 FLCTINFRRTPSKFFSLMFPLSKSMFFFNSFQLNELFSSSDSKYAI 351
           F  +++F +   K   L+  L   +FFF+SF  + LFS   S++ +
Sbjct: 74  FCASLSFYKA-FKIGILLNQLITPLFFFHSFMTSVLFSQVASRWPL 118


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -3

Query: 691 HLLYNLELYTFCISLYXXXXXXXXXXXLIYFLLTFHNRALEVHLLHLKIVLHFF 530
           HLL+ L +Y F + L+             YF   F      VHLL L  + HFF
Sbjct: 126 HLLFLLCIYYFVVPLFFLLCIY-------YFYCAFI--IFTVHLLFLLCIYHFF 170


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 617  KEKHLYLKHIETYTK 661
            KE HL + +++TYT+
Sbjct: 1057 KEHHLKISNLKTYTQ 1071


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/23 (30%), Positives = 17/23 (73%)
 Frame = -3

Query: 598 LLTFHNRALEVHLLHLKIVLHFF 530
           +++ ++++   + +H+KIVL FF
Sbjct: 48  VVSIYSKSFHRNEIHIKIVLMFF 70


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -1

Query: 360 ICYLTAYTFNWC 325
           +CY T  T +WC
Sbjct: 318 VCYSTIGTVSWC 329


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,606
Number of Sequences: 336
Number of extensions: 3308
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)