Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23o23
(219 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 29 0.67
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 29 1.2
AY070614-1|AAL48085.1| 605|Drosophila melanogaster RE71584p pro... 27 2.7
AE014297-1557|AAF54839.1| 635|Drosophila melanogaster CG18616-P... 27 2.7
AE013599-3144|AAM70856.1| 980|Drosophila melanogaster CG30389-P... 27 4.7
AE013599-3143|AAF46685.2| 980|Drosophila melanogaster CG30389-P... 27 4.7
X95246-1|CAA64535.1| 544|Drosophila melanogaster Rot57 protein ... 26 6.2
BT014926-1|AAT47777.1| 742|Drosophila melanogaster AT12465p pro... 26 6.2
BT011397-1|AAR96189.1| 998|Drosophila melanogaster AT24804p pro... 26 6.2
AY119510-1|AAM50164.1| 998|Drosophila melanogaster GH12664p pro... 26 6.2
AM412927-1|CAL85550.1| 287|Drosophila melanogaster CG16772 prot... 26 6.2
AM412925-1|CAL85548.1| 287|Drosophila melanogaster CG16772 prot... 26 6.2
AE014297-4541|AAN14216.1| 742|Drosophila melanogaster CG31025-P... 26 6.2
AE014297-4540|AAF57010.4| 998|Drosophila melanogaster CG31025-P... 26 6.2
AE014297-882|AAF54339.1| 417|Drosophila melanogaster CG11997-PA... 26 6.2
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 29.5 bits (63), Expect = 0.67
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -1
Query: 171 SCAVSRRAFSQSCRAVSASRRATIISLANKMSDRLASAKSALATVNFCVRSSILA 7
SC +++ + S RAVS + +I +SD A A S + ++ ++ LA
Sbjct: 782 SCVSTKKTYLDSARAVSRTMALRLIRGFRTISDDAAHALSGITPIDLDIKGKYLA 836
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 198 CAMSAMRLASCAVSRRAFSQSCRAV 124
C + + ASCAV R + Q CR V
Sbjct: 2148 CNLPCTKTASCAVGERCYQQVCRKV 2172
>AY070614-1|AAL48085.1| 605|Drosophila melanogaster RE71584p
protein.
Length = 605
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +3
Query: 45 PTQ-IWRKPTDRSFCLPTK*LWLDA 116
PTQ WR P D +FC P+K + L++
Sbjct: 461 PTQESWRHPQDNNFCNPSKPVSLES 485
>AE014297-1557|AAF54839.1| 635|Drosophila melanogaster CG18616-PA
protein.
Length = 635
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +3
Query: 45 PTQ-IWRKPTDRSFCLPTK*LWLDA 116
PTQ WR P D +FC P+K + L++
Sbjct: 461 PTQESWRHPQDNNFCNPSKPVSLES 485
>AE013599-3144|AAM70856.1| 980|Drosophila melanogaster CG30389-PC,
isoform C protein.
Length = 980
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 42 WPTQIWRKPTDRSFCLPTK*LWL 110
W +W TD+ CLPT LW+
Sbjct: 110 WVQYVWH--TDKGICLPTIILWM 130
>AE013599-3143|AAF46685.2| 980|Drosophila melanogaster CG30389-PA,
isoform A protein.
Length = 980
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 42 WPTQIWRKPTDRSFCLPTK*LWL 110
W +W TD+ CLPT LW+
Sbjct: 110 WVQYVWH--TDKGICLPTIILWM 130
>X95246-1|CAA64535.1| 544|Drosophila melanogaster Rot57 protein
protein.
Length = 544
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 157 AARVFAILPSRFSVASSHNHFVGKQNER 74
AAR+ +LP +VA+S H+ G R
Sbjct: 285 AARILNVLPRALAVAASGAHYEGPSGHR 312
>BT014926-1|AAT47777.1| 742|Drosophila melanogaster AT12465p
protein.
Length = 742
Score = 26.2 bits (55), Expect = 6.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 212 WLSRLAQCPPCGWPAAP 162
WL ++A CP CG+ P
Sbjct: 131 WLPKVAACPCCGYKPVP 147
>BT011397-1|AAR96189.1| 998|Drosophila melanogaster AT24804p
protein.
Length = 998
Score = 26.2 bits (55), Expect = 6.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 212 WLSRLAQCPPCGWPAAP 162
WL ++A CP CG+ P
Sbjct: 387 WLPKVAACPCCGYKPVP 403
>AY119510-1|AAM50164.1| 998|Drosophila melanogaster GH12664p
protein.
Length = 998
Score = 26.2 bits (55), Expect = 6.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 212 WLSRLAQCPPCGWPAAP 162
WL ++A CP CG+ P
Sbjct: 387 WLPKVAACPCCGYKPVP 403
>AM412927-1|CAL85550.1| 287|Drosophila melanogaster CG16772 protein
protein.
Length = 287
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -2
Query: 179 GWPAAPFRGARFRNLAEPFQRRVEPQSFRWQTK*AIGWLPPNLRWP 42
G+P+ P FR+ P+Q +V PQ W + G L P +P
Sbjct: 186 GYPSYP----TFRSPYSPYQPQVFPQPRNWPSFPGYGPLSPGFGYP 227
>AM412925-1|CAL85548.1| 287|Drosophila melanogaster CG16772 protein
protein.
Length = 287
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -2
Query: 179 GWPAAPFRGARFRNLAEPFQRRVEPQSFRWQTK*AIGWLPPNLRWP 42
G+P+ P FR+ P+Q +V PQ W + G L P +P
Sbjct: 186 GYPSYP----TFRSPYSPYQPQVFPQPRNWPSFPGYGPLSPGFGYP 227
>AE014297-4541|AAN14216.1| 742|Drosophila melanogaster CG31025-PB,
isoform B protein.
Length = 742
Score = 26.2 bits (55), Expect = 6.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 212 WLSRLAQCPPCGWPAAP 162
WL ++A CP CG+ P
Sbjct: 131 WLPKVAACPCCGYKPVP 147
>AE014297-4540|AAF57010.4| 998|Drosophila melanogaster CG31025-PA,
isoform A protein.
Length = 998
Score = 26.2 bits (55), Expect = 6.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 212 WLSRLAQCPPCGWPAAP 162
WL ++A CP CG+ P
Sbjct: 387 WLPKVAACPCCGYKPVP 403
>AE014297-882|AAF54339.1| 417|Drosophila melanogaster CG11997-PA
protein.
Length = 417
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 133 PSRFSVASSHNHFVGKQNERSVGF 62
P ++AS H HFVGK + + +G+
Sbjct: 76 PPPTTIASMHPHFVGKPHVQLLGY 99
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,665,520
Number of Sequences: 53049
Number of extensions: 196620
Number of successful extensions: 707
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 24,988,368
effective HSP length: 52
effective length of database: 22,229,820
effective search space used: 444596400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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