Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23o17
(796 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81461-8|CAB03839.1| 442|Caenorhabditis elegans Hypothetical pr... 103 1e-22
U88169-5|AAB42235.2| 367|Caenorhabditis elegans Hypothetical pr... 29 2.9
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 29 3.8
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 29 3.8
AF106575-3|AAC78173.2| 287|Caenorhabditis elegans Hypothetical ... 29 3.8
AF106575-2|AAQ62448.1| 506|Caenorhabditis elegans Hypothetical ... 29 3.8
U42830-5|AAC48280.2| 437|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z79605-2|CAB01903.1| 342|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z72512-3|CAA96665.2| 310|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF106575-4|AAC78172.2| 548|Caenorhabditis elegans Hypothetical ... 28 8.9
AC087078-5|AAK66024.2| 191|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z81461-8|CAB03839.1| 442|Caenorhabditis elegans Hypothetical
protein C04F12.10 protein.
Length = 442
Score = 103 bits (247), Expect = 1e-22
Identities = 52/182 (28%), Positives = 95/182 (52%)
Frame = +1
Query: 139 DEDAILYLILLFTWVEYLWEQYLSLRQLKIYKTNNTIPEDLKEMLNEDLFKKARLYGIDK 318
D + +L W +LW+QY++ RQ K +K P ++KE++ E+ +KKAR Y ID
Sbjct: 2 DASCLFKALLATNWALFLWDQYITFRQYKAHKNAVKRPNEVKELIGEEDYKKARDYKIDN 61
Query: 319 AQFKIVKELYSTILTSVILYNKWIYVAWRKSEQIGAMFNISPDREIIISCIFMTFITLFN 498
F ++ +L + L + W + A + + +F++ ++
Sbjct: 62 HLFGFFHSWFNQLLLTAQLIGGYYPFLWYAT----ASYPLH-------VAVFLSINSIIE 110
Query: 499 FIVNKPFTIYGVFVLEERHGFNKQTVRFFIKDQIKSLFLSLVITLPIISVAIYIIMLGGD 678
I++ P+ +Y F++E+ HGFNKQT+ F+ D+IK + + +T+PI+ +II+ GG
Sbjct: 111 TIIDLPWDLYSTFIIEDAHGFNKQTIGFYFVDKIKKMLVGFALTMPIVYGIEWIIVNGGP 170
Query: 679 MF 684
F
Sbjct: 171 YF 172
>U88169-5|AAB42235.2| 367|Caenorhabditis elegans Hypothetical
protein T03F1.7 protein.
Length = 367
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 172 FTWVEYLWEQYLSLRQLKIYKTNNTI-PEDLKEMLNEDLFKKARL 303
F +E + Q RQ + K T+ PE+L++ L++DL KK R+
Sbjct: 242 FEVLEKVCRQVFHYRQKYVTKGLKTLYPEELEDELSDDLLKKCRI 286
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +1
Query: 178 WVEYLWEQYLSLRQLKIYKTNNTIPEDLKEMLNEDLFKKARLYGIDKAQFKIVKELYSTI 357
W Y +QY QLK+ +T NT E +E+LN A L + ++ KE +
Sbjct: 803 WDSYKVDQY----QLKLAETVNTYQERCEELLNVVRIVNADLNVLKSCRYD--KETIENL 856
Query: 358 LTSV 369
LTS+
Sbjct: 857 LTSI 860
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +1
Query: 178 WVEYLWEQYLSLRQLKIYKTNNTIPEDLKEMLNEDLFKKARLYGIDKAQFKIVKELYSTI 357
W Y +QY QLK+ +T NT E +E+LN A L + ++ KE +
Sbjct: 803 WDSYKVDQY----QLKLAETVNTYQERCEELLNVVRIVNADLNVLKSCRYD--KETIENL 856
Query: 358 LTSV 369
LTS+
Sbjct: 857 LTSI 860
>AF106575-3|AAC78173.2| 287|Caenorhabditis elegans Hypothetical
protein K04F1.14a protein.
Length = 287
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -2
Query: 588 NKESYSLLIKSMSFLKNKHTINGKWF 511
N E Y+ ++++SF KN TING+ F
Sbjct: 105 NLEVYNTELQNLSFFKNLQTINGQLF 130
>AF106575-2|AAQ62448.1| 506|Caenorhabditis elegans Hypothetical
protein K04F1.14b protein.
Length = 506
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -2
Query: 588 NKESYSLLIKSMSFLKNKHTINGKWF 511
N E Y+ ++++SF KN TING+ F
Sbjct: 220 NLEVYNTELQNLSFFKNLQTINGQLF 245
>U42830-5|AAC48280.2| 437|Caenorhabditis elegans Hypothetical
protein C53B7.7 protein.
Length = 437
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -3
Query: 533 TP*MVNGLLTIKLNNVINVIKMQLIIISLSGEMLN-IAPICSLFLH 399
TP ++N LT ++ N+ N IKM + + + + N ++PI + FL+
Sbjct: 157 TPWVINNNLTEEMKNITNAIKMPVSLTKYTNFIYNLLSPIETDFLN 202
>Z79605-2|CAB01903.1| 342|Caenorhabditis elegans Hypothetical
protein ZK678.2 protein.
Length = 342
Score = 28.3 bits (60), Expect = 6.7
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = -3
Query: 506 TIKLNNVINVIKMQLIIISLSGEMLNIAPICSLFLHAT*IHLLYNITDVSIVLYSSLTIL 327
++KL N NVIK QL+ G M+ + +L + N TD++I LY TIL
Sbjct: 219 SLKLENFANVIKSQLV-----GRMIQLRVTKEEYLLMA-VLFACNPTDINISLYGK-TIL 271
Query: 326 N 324
N
Sbjct: 272 N 272
>Z72512-3|CAA96665.2| 310|Caenorhabditis elegans Hypothetical
protein R07B5.5 protein.
Length = 310
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 636 NNICSNLYNNAWRRHVCGVAMAIYYCCNT 722
N IC+ + N +H CG+ +AI CC++
Sbjct: 27 NIICAT-WKNKTLQHKCGIMLAILACCDS 54
>Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.7 protein.
Length = 329
Score = 28.3 bits (60), Expect = 6.7
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Frame = +1
Query: 343 LYSTILTSVILYNKWIYVAWRKSEQ---IGAMFNISP---DREIIISCIFMTFITLFNFI 504
++ +I T + L+N I + R+ + F + P RE+I S + F+T F FI
Sbjct: 188 MFFSICTFISLFNLVISLLIRRHNEKLEYSTPFVVGPRFRKREVIDSTSTICFLTFFQFI 247
Query: 505 VNKPFTIYGVFVLEERHGFNKQTVRFFIKDQIKSLFLSLVITLPIISVAIYIIML 669
++ +GVF+L T+R I + ++ V T+P I+ + I+++
Sbjct: 248 FMFIYS-FGVFLL--------GTIREIIGYEQYYFWVVWVYTIPFIAASFPILLI 293
>AF106575-4|AAC78172.2| 548|Caenorhabditis elegans Hypothetical
protein K04F1.13 protein.
Length = 548
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 582 ESYSLLIKSMSFLKNKHTINGKW 514
E Y+ ++ +SFL+N TI+G W
Sbjct: 227 EVYNTSLQDLSFLENLETISGNW 249
>AC087078-5|AAK66024.2| 191|Caenorhabditis elegans Hypothetical
protein Y34F4.5 protein.
Length = 191
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 286 FKKARLYGIDKAQFKIVKELYSTILTSVILYNKWIYV 396
F A +YG + KI K YS + S+ Y KW ++
Sbjct: 71 FMVALMYGFIVYETKIKKRQYSKEILSLFYYFKWFFL 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,829,149
Number of Sequences: 27780
Number of extensions: 336503
Number of successful extensions: 941
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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