Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23o09
         (769 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071277-1|AAL48899.1|  155|Drosophila melanogaster RE30690p pro...   171   9e-43
AE014134-2347|AAF53299.1|  155|Drosophila melanogaster CG9282-PA...   171   9e-43
AY071693-1|AAL49315.1|  123|Drosophila melanogaster RH14088p pro...    94   2e-19
AY113325-1|AAM29330.1|  191|Drosophila melanogaster AT28833p pro...    62   6e-10
AE014297-1297|AAF54637.1|  191|Drosophila melanogaster CG6764-PA...    62   6e-10

>AY071277-1|AAL48899.1|  155|Drosophila melanogaster RE30690p
           protein.
          Length = 155

 Score =  171 bits (416), Expect = 9e-43
 Identities = 79/110 (71%), Positives = 91/110 (82%)
 Frame = +3

Query: 24  MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 203
           MKIGLCA+SGYKIYPGHGKTMVK+DGK+FTFL+ KCE ++LM+RNPRKVTWTVLYRRK +
Sbjct: 1   MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHR 60

Query: 204 KGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEVRKAQREQAIK 353
           KG EEE               IVGASL++I+AKRNMKPEVRKAQR+QAIK
Sbjct: 61  KGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEVRKAQRDQAIK 110


>AE014134-2347|AAF53299.1|  155|Drosophila melanogaster CG9282-PA
           protein.
          Length = 155

 Score =  171 bits (416), Expect = 9e-43
 Identities = 79/110 (71%), Positives = 91/110 (82%)
 Frame = +3

Query: 24  MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFK 203
           MKIGLCA+SGYKIYPGHGKTMVK+DGK+FTFL+ KCE ++LM+RNPRKVTWTVLYRRK +
Sbjct: 1   MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHR 60

Query: 204 KGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEVRKAQREQAIK 353
           KG EEE               IVGASL++I+AKRNMKPEVRKAQR+QAIK
Sbjct: 61  KGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEVRKAQRDQAIK 110


>AY071693-1|AAL49315.1|  123|Drosophila melanogaster RH14088p
           protein.
          Length = 123

 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 46/69 (66%), Positives = 52/69 (75%)
 Frame = +3

Query: 147 MRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGASLSDIMAKRNMKPEVR 326
           M+RNPRKVTWTVLYRRK +KG EEE               IVGASL++I+AKRNMKPEVR
Sbjct: 1   MKRNPRKVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEVR 60

Query: 327 KAQREQAIK 353
           KAQR+QAIK
Sbjct: 61  KAQRDQAIK 69


>AY113325-1|AAM29330.1|  191|Drosophila melanogaster AT28833p
           protein.
          Length = 191

 Score = 62.5 bits (145), Expect = 6e-10
 Identities = 27/57 (47%), Positives = 33/57 (57%)
 Frame = +3

Query: 24  MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 194
           M+I  C +   KIYPGHG   V+ D K F F   KC  A   ++NPRKV WT  YR+
Sbjct: 1   MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57


>AE014297-1297|AAF54637.1|  191|Drosophila melanogaster CG6764-PA
           protein.
          Length = 191

 Score = 62.5 bits (145), Expect = 6e-10
 Identities = 27/57 (47%), Positives = 33/57 (57%)
 Frame = +3

Query: 24  MKIGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 194
           M+I  C +   KIYPGHG   V+ D K F F   KC  A   ++NPRKV WT  YR+
Sbjct: 1   MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,453,199
Number of Sequences: 53049
Number of extensions: 605624
Number of successful extensions: 1156
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)