Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23o08
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.3  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   8.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.3  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +2

Query: 263  TLHKLASQYLNFLXFMLCGTVTQHVV 340
            T+H +  Q+L +   ++   ++QH V
Sbjct: 1234 TIHNVIGQFLGYFIGLITFVMSQHCV 1259


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 313 LWDCYSTRCCAKIILQA 363
           LW C ST C   +I+ A
Sbjct: 257 LWSCTSTNCPRFLIMLA 273


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 202 CIMGVD*FLPTGECIKIHIXDA 267
           C++G     P+GE +K  I DA
Sbjct: 44  CLLGTGKCTPSGEELKKDIPDA 65


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +3

Query: 459 VFVCNVYCFIVMV 497
           +FV N++C+IV +
Sbjct: 128 IFVLNIWCWIVEI 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,389
Number of Sequences: 336
Number of extensions: 1930
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)