Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23n24
         (211 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   0.69 
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               19   4.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    19   4.9  
S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               19   6.4  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    19   6.4  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    19   8.5  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       19   8.5  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    19   8.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    19   8.5  

>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 0.69
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
 Frame = -2

Query: 174 GPYYSM*HIHTISRLYASR--TDMPHTISFFYPSPYF 70
           G  Y   H   ++R Y  R   D+PH   F +  P++
Sbjct: 256 GEEYLYSHKLLLNRYYLERLSNDLPHLEEFDWQKPFY 292


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 103 YYFFLLSITLLSL 65
           ++FF+L ITL+ L
Sbjct: 6   HFFFILVITLIFL 18


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 142 YFSLVCLSH*HASYYFFLLSI 80
           YFS+VC +  H S   F  +I
Sbjct: 11  YFSIVCQAKAHYSLRDFKANI 31


>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 19.0 bits (37), Expect = 6.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 116 LTCLILFLSFIHHLTFF 66
           L C+ LFLS I   ++F
Sbjct: 5   LRCIYLFLSVILITSYF 21


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 19.0 bits (37), Expect = 6.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 126 HTSEK*YEC 152
           HT EK Y+C
Sbjct: 114 HTGEKPYQC 122


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 18.6 bits (36), Expect = 8.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 126 HTSEK*YEC 152
           HT EK +EC
Sbjct: 4   HTGEKPFEC 12


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 18.6 bits (36), Expect = 8.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 154 LHRIIRSCRAYGRGKA 201
           +HRI R+ R   RG+A
Sbjct: 536 VHRIGRTGRVGNRGRA 551


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 18.6 bits (36), Expect = 8.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 85  SITLLSLPG 59
           SITL+S PG
Sbjct: 92  SITLISFPG 100


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 18.6 bits (36), Expect = 8.5
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -1

Query: 163 FYVTHSYYFSLVCLSH*HASYYFFLLSITLLSLPG 59
           F++  S +F+ +        YY+F    T  +L G
Sbjct: 455 FFICPSIHFAQLFADRGMKVYYYFFTQRTSTNLWG 489


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,407
Number of Sequences: 438
Number of extensions: 1198
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  3039192
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)