Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23n21
(735 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069580-1|AAL39725.1| 406|Drosophila melanogaster LD31675p pro... 196 3e-50
AE014134-2099|AAF53122.1| 406|Drosophila melanogaster CG14939-P... 196 3e-50
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein. 32 0.70
AE014298-1758|AAN09642.1| 330|Drosophila melanogaster CG32655-P... 30 3.8
AE014296-769|AAN11587.2| 898|Drosophila melanogaster CG14998-PE... 29 5.0
BT003751-1|AAO41415.1| 286|Drosophila melanogaster RH56454p pro... 29 8.7
AY061354-1|AAL28902.1| 677|Drosophila melanogaster LD28135p pro... 29 8.7
AY060677-1|AAL28225.1| 626|Drosophila melanogaster GH11117p pro... 29 8.7
AE014297-4807|AAF57196.2| 626|Drosophila melanogaster CG1937-PA... 29 8.7
AE014296-770|AAN11588.2| 983|Drosophila melanogaster CG14998-PD... 29 8.7
AE013599-678|AAF59064.1| 677|Drosophila melanogaster CG14749-PA... 29 8.7
>AY069580-1|AAL39725.1| 406|Drosophila melanogaster LD31675p
protein.
Length = 406
Score = 196 bits (478), Expect = 3e-50
Identities = 105/167 (62%), Positives = 121/167 (72%), Gaps = 27/167 (16%)
Frame = +1
Query: 316 SSNNIQHISEREPDDGDIDPSQDPMAGTIFMERSKASIENG-MTRKRSQHQIADNK---- 480
+ N+QHISERE +G+ DPS DP A T+F+ERSK +ENG MTRKRSQ QIA
Sbjct: 79 NQQNLQHISEREALEGEEDPSVDPTAATMFLERSK--VENGGMTRKRSQQQIAQQAGSGG 136
Query: 481 ----------------------LKKSSSCSTIYLDDSTVSQPNLKNTVRCVALAIYYHIK 594
+KKSSSCSTIYLDDSTVSQPNLKNTV+CV+LAIYYHIK
Sbjct: 137 GGGGGGGGGSTPGGNSCGGGGGMKKSSSCSTIYLDDSTVSQPNLKNTVKCVSLAIYYHIK 196
Query: 595 NRMSERRLDIFDEKLHPLSKEGVSDDYDKYNPEHKQIYKFVRTLFNA 735
NR S+RRLDIFDEKLHPL+ + V D+YD +NPEH+QIYKFVRTLFNA
Sbjct: 197 NRQSDRRLDIFDEKLHPLTHDQVPDNYDTHNPEHRQIYKFVRTLFNA 243
Score = 31.9 bits (69), Expect = 0.93
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 220 MGNQNSCCCYRSPSPIRK 273
MGN+NSCC Y SP RK
Sbjct: 1 MGNKNSCCAYSSPQSDRK 18
>AE014134-2099|AAF53122.1| 406|Drosophila melanogaster CG14939-PA
protein.
Length = 406
Score = 196 bits (478), Expect = 3e-50
Identities = 105/167 (62%), Positives = 121/167 (72%), Gaps = 27/167 (16%)
Frame = +1
Query: 316 SSNNIQHISEREPDDGDIDPSQDPMAGTIFMERSKASIENG-MTRKRSQHQIADNK---- 480
+ N+QHISERE +G+ DPS DP A T+F+ERSK +ENG MTRKRSQ QIA
Sbjct: 79 NQQNLQHISEREALEGEEDPSVDPTAATMFLERSK--VENGGMTRKRSQQQIAQQAGSGG 136
Query: 481 ----------------------LKKSSSCSTIYLDDSTVSQPNLKNTVRCVALAIYYHIK 594
+KKSSSCSTIYLDDSTVSQPNLKNTV+CV+LAIYYHIK
Sbjct: 137 GGGGGGGGGSTPGGNSCGGGGGMKKSSSCSTIYLDDSTVSQPNLKNTVKCVSLAIYYHIK 196
Query: 595 NRMSERRLDIFDEKLHPLSKEGVSDDYDKYNPEHKQIYKFVRTLFNA 735
NR S+RRLDIFDEKLHPL+ + V D+YD +NPEH+QIYKFVRTLFNA
Sbjct: 197 NRQSDRRLDIFDEKLHPLTHDQVPDNYDTHNPEHRQIYKFVRTLFNA 243
Score = 31.9 bits (69), Expect = 0.93
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 220 MGNQNSCCCYRSPSPIRK 273
MGN+NSCC Y SP RK
Sbjct: 1 MGNKNSCCAYSSPQSDRK 18
>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
Length = 1715
Score = 32.3 bits (70), Expect = 0.70
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +1
Query: 262 PIRKDIVKLEDYLPEGEVSSNNIQHISEREPDDGDIDPSQDPMAGTIFMER---SKASIE 432
P +K LE PE + S + + S+ E GD D DP+ G + R ++ +
Sbjct: 417 PNQKSDSSLESSSPERQDSESESRQASDEESSSGDSDYLIDPVTGWLSRRRETSTEREEK 476
Query: 433 NGMTRKRSQHQIADNKLKKS 492
+ +++ S +I D + ++S
Sbjct: 477 SDQSQQESSEEITDEQKEES 496
>AE014298-1758|AAN09642.1| 330|Drosophila melanogaster CG32655-PA
protein.
Length = 330
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +1
Query: 256 PSPIRKDIVKLEDYLPEGEVSSNNIQHIS-EREPDDGDIDPSQDPMAGTIFMERSKASIE 432
P+ +VK P G +S I+ ER P + + + P ER KAS
Sbjct: 95 PATSASSVVKKSSEKPSGSRTSPIIKSARLERRPSNKSVTIADPPTQSLTTSERPKASSS 154
Query: 433 NGMTRKRSQHQI 468
G+ +K ++ +
Sbjct: 155 QGLKKKENRRSL 166
>AE014296-769|AAN11587.2| 898|Drosophila melanogaster CG14998-PE,
isoform E protein.
Length = 898
Score = 29.5 bits (63), Expect = 5.0
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +1
Query: 409 ERSKASIEN----GMTRKRSQHQIADNKLKKSSSCSTIYLD-DSTVSQPNLKNTV 558
+R SI N +TR+ S+ ++AD+ KK +S ST D DS S P + +V
Sbjct: 165 QRRSTSISNVAGASLTRRSSERELADSGAKKRASSSTDRQDEDSVDSSPMVFRSV 219
>BT003751-1|AAO41415.1| 286|Drosophila melanogaster RH56454p
protein.
Length = 286
Score = 28.7 bits (61), Expect = 8.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 658 LLCSKDEVSHQKYLTCAQTFYSLC 587
++C +D V+H K L C F++ C
Sbjct: 166 IICREDMVNHSKKLPCGHIFHTTC 189
>AY061354-1|AAL28902.1| 677|Drosophila melanogaster LD28135p
protein.
Length = 677
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 628 DEKLHPLSKEGVSDDYDKYNPEHKQIYKFVRTL 726
D+KLH L+ EGVS ++N +++ I K + +L
Sbjct: 175 DQKLHKLALEGVSRCQRRFNQKYEGIAKILLSL 207
>AY060677-1|AAL28225.1| 626|Drosophila melanogaster GH11117p
protein.
Length = 626
Score = 28.7 bits (61), Expect = 8.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 658 LLCSKDEVSHQKYLTCAQTFYSLC 587
++C +D V+H K L C F++ C
Sbjct: 290 IICREDMVNHSKKLPCGHIFHTTC 313
>AE014297-4807|AAF57196.2| 626|Drosophila melanogaster CG1937-PA
protein.
Length = 626
Score = 28.7 bits (61), Expect = 8.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 658 LLCSKDEVSHQKYLTCAQTFYSLC 587
++C +D V+H K L C F++ C
Sbjct: 290 IICREDMVNHSKKLPCGHIFHTTC 313
>AE014296-770|AAN11588.2| 983|Drosophila melanogaster CG14998-PD,
isoform D protein.
Length = 983
Score = 28.7 bits (61), Expect = 8.7
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +1
Query: 409 ERSKASIEN----GMTRKRSQHQIADNKLKKSSSCSTIYLDD 522
+R SI N +TR+ S+ ++AD+ KK +S ST DD
Sbjct: 165 QRRSTSISNVAGASLTRRSSERELADSGAKKRASSSTDRQDD 206
>AE013599-678|AAF59064.1| 677|Drosophila melanogaster CG14749-PA
protein.
Length = 677
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 628 DEKLHPLSKEGVSDDYDKYNPEHKQIYKFVRTL 726
D+KLH L+ EGVS ++N +++ I K + +L
Sbjct: 175 DQKLHKLALEGVSRCQRRFNQKYEGIAKILLSL 207
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,911,228
Number of Sequences: 53049
Number of extensions: 651998
Number of successful extensions: 2201
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2198
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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