Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23n21
(735 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15313-10|AAP68920.1| 355|Caenorhabditis elegans Hypothetical p... 142 2e-34
L15313-9|AAP68921.1| 357|Caenorhabditis elegans Hypothetical pr... 142 2e-34
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 32 0.37
AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical ... 31 0.85
AL031629-2|CAA20975.1| 248|Caenorhabditis elegans Hypothetical ... 29 2.6
AF125442-4|AAD12794.1| 317|Caenorhabditis elegans Serpentine re... 29 3.4
Z72506-7|CAA96620.2| 293|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF098997-9|AAC68720.1| 325|Caenorhabditis elegans Serpentine re... 29 4.5
AF043699-1|AAB97563.2| 202|Caenorhabditis elegans Hypothetical ... 29 4.5
Z49132-12|CAA88990.3| 931|Caenorhabditis elegans Hypothetical p... 28 6.0
Z48716-7|CAA88602.3| 931|Caenorhabditis elegans Hypothetical pr... 28 6.0
U53147-2|AAA96114.2| 935|Caenorhabditis elegans Hypothetical pr... 28 6.0
U29612-5|AAA68800.2| 409|Caenorhabditis elegans Inositol polyph... 28 6.0
AL110499-4|CAD30454.1| 197|Caenorhabditis elegans Hypothetical ... 28 6.0
AF411588-1|AAL72637.1| 400|Caenorhabditis elegans inositol poly... 28 6.0
AF353303-1|AAK32717.1| 367|Caenorhabditis elegans GATA-like tra... 28 6.0
AF100657-1|AAC68957.3| 367|Caenorhabditis elegans Erythroid-lik... 28 6.0
Z81079-5|CAB03082.2| 505|Caenorhabditis elegans Hypothetical pr... 28 7.9
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 28 7.9
AJ238443-1|CAB41469.1| 454|Caenorhabditis elegans TBP-like fact... 28 7.9
AF228692-1|AAF59926.1| 505|Caenorhabditis elegans TBP-like fact... 28 7.9
>L15313-10|AAP68920.1| 355|Caenorhabditis elegans Hypothetical
protein ZK353.1a protein.
Length = 355
Score = 142 bits (344), Expect = 2e-34
Identities = 75/160 (46%), Positives = 106/160 (66%), Gaps = 15/160 (9%)
Frame = +1
Query: 301 PEGEVSSNNIQHISEREPDDG-DIDPSQDPMAGTIFMERSKASIENGMTRKR-------- 453
P E S+N + HISERE +G + DPS +P A FMERSK+ ++ R+
Sbjct: 40 PRDETSTNFLPHISEREVTEGYEEDPSTNPTARPTFMERSKSEMKLKDNRRSCYMLDALA 99
Query: 454 --SQHQ-IADNKLKKSSSCSTIYLDDSTVSQPNLKNTVRCVALAIYYHI---KNRMSERR 615
H I L+KSSSCSTIY+DDSTVSQP+LKNT++C++LAIYYHI KNR ER
Sbjct: 100 AGGHHPGILPRSLRKSSSCSTIYIDDSTVSQPHLKNTIKCISLAIYYHISNRKNRGHERL 159
Query: 616 LDIFDEKLHPLSKEGVSDDYDKYNPEHKQIYKFVRTLFNA 735
++IF+E+LHP+ ++ + + +P+H+ IY+FVR LF++
Sbjct: 160 MEIFEERLHPIFRDPIPPEQMTRDPDHRNIYRFVRNLFSS 199
>L15313-9|AAP68921.1| 357|Caenorhabditis elegans Hypothetical
protein ZK353.1b protein.
Length = 357
Score = 142 bits (344), Expect = 2e-34
Identities = 75/160 (46%), Positives = 106/160 (66%), Gaps = 15/160 (9%)
Frame = +1
Query: 301 PEGEVSSNNIQHISEREPDDG-DIDPSQDPMAGTIFMERSKASIENGMTRKR-------- 453
P E S+N + HISERE +G + DPS +P A FMERSK+ ++ R+
Sbjct: 42 PRDETSTNFLPHISEREVTEGYEEDPSTNPTARPTFMERSKSEMKLKDNRRSCYMLDALA 101
Query: 454 --SQHQ-IADNKLKKSSSCSTIYLDDSTVSQPNLKNTVRCVALAIYYHI---KNRMSERR 615
H I L+KSSSCSTIY+DDSTVSQP+LKNT++C++LAIYYHI KNR ER
Sbjct: 102 AGGHHPGILPRSLRKSSSCSTIYIDDSTVSQPHLKNTIKCISLAIYYHISNRKNRGHERL 161
Query: 616 LDIFDEKLHPLSKEGVSDDYDKYNPEHKQIYKFVRTLFNA 735
++IF+E+LHP+ ++ + + +P+H+ IY+FVR LF++
Sbjct: 162 MEIFEERLHPIFRDPIPPEQMTRDPDHRNIYRFVRNLFSS 201
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily assigned
gene nameprotein 213 protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/102 (19%), Positives = 42/102 (41%)
Frame = +1
Query: 415 SKASIENGMTRKRSQHQIADNKLKKSSSCSTIYLDDSTVSQPNLKNTVRCVALAIYYHIK 594
SKA++E+G + Q + S + +D+ S+P ++ + A+++ +
Sbjct: 818 SKAAVEDGQKTRLDTQQKTEMFTSALESQVEMLMDELKASEPGMEENIPVKFFAVFWMLT 877
Query: 595 NRMSERRLDIFDEKLHPLSKEGVSDDYDKYNPEHKQIYKFVR 720
E ++ L L K+ D + K KQ+ +R
Sbjct: 878 MYDIEVPTAAYERTLDALKKQSREDSHGKAKKTDKQLESKLR 919
>AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical
protein C48E7.8 protein.
Length = 820
Score = 31.1 bits (67), Expect = 0.85
Identities = 17/77 (22%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +1
Query: 283 KLEDYLPEGEVSSNNIQHISEREPDDGDIDPSQDPM----AGTIFMERSKASIENGMTRK 450
++E ++ G+ + + E + D D+DPS++ G + ++RS + +
Sbjct: 744 RMERHVSFGDTEIEKYEVVEEGDVDGNDMDPSENTRQWIETGQLCLQRSDIDMLCAKQEE 803
Query: 451 RSQHQIADNKLKKSSSC 501
++ +I D+ K S+SC
Sbjct: 804 KANVKIEDDDGKTSTSC 820
>AL031629-2|CAA20975.1| 248|Caenorhabditis elegans Hypothetical
protein Y106G6D.2 protein.
Length = 248
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = +1
Query: 439 MTRKRSQHQIADNKLKKSSSCSTIYLDDSTVSQPNLKNTVRCVALAIYYHIKNRMSERRL 618
+TRKR + ++ KK +Y D ++ + + NT+ L +N S+R+L
Sbjct: 74 VTRKRDTIRFTEHLKKKQEK---LYKDLESIKEDSKNNTIHGNVLRFRREYENEDSKRKL 130
Query: 619 DIFDEKLHPLSKE 657
D L L E
Sbjct: 131 DEMKNTLDQLKSE 143
>AF125442-4|AAD12794.1| 317|Caenorhabditis elegans Serpentine
receptor, class v protein21 protein.
Length = 317
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 95 KVLWAFYVL-FLCRLIISVYLVVTQCV*NDNEHS 193
K W + + FLC I+ VY+++ C+ +HS
Sbjct: 18 KFYWNYLIYYFLCIAILPVYILIVACILKSRKHS 51
>Z72506-7|CAA96620.2| 293|Caenorhabditis elegans Hypothetical
protein F07A5.6 protein.
Length = 293
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 256 PSPIRKDIVKLEDYLPEGEVSSNNIQHISEREPDDGDIDPSQDPMAGT 399
P+P + + ED + E EV + E E DDG++ +DP+ T
Sbjct: 104 PTPDEPEFYEEED-VDESEVVEEDYAQEEEEEGDDGEVVEYEDPVVVT 150
>AF098997-9|AAC68720.1| 325|Caenorhabditis elegans Serpentine
receptor, class i protein42 protein.
Length = 325
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +3
Query: 75 FHKSRMIR--YYGPFMSYFCVGLLFPYI 152
FH S +++ Y FM+Y CVG+ PYI
Sbjct: 57 FHLSLLVQPMYLFRFMTYSCVGIAAPYI 84
>AF043699-1|AAB97563.2| 202|Caenorhabditis elegans Hypothetical
protein K02F2.5 protein.
Length = 202
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 601 MSERRLDIFDEKLHPLSKEGVSDDYDKYNPEHKQIYKFV 717
+ E+ D+ D++L L+ E V ++ D+YNPE + Y+ +
Sbjct: 81 LREQLFDLSDDQLAVLA-EIVQNEIDQYNPESVEAYEVI 118
>Z49132-12|CAA88990.3| 931|Caenorhabditis elegans Hypothetical
protein F59B10.1 protein.
Length = 931
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 2/97 (2%)
Frame = +1
Query: 292 DYLP--EGEVSSNNIQHISEREPDDGDIDPSQDPMAGTIFMERSKASIENGMTRKRSQHQ 465
DYL EG V + + GD+D D I ++ ++ + + +
Sbjct: 551 DYLTIDEGRVFYETVMATQQLCRMTGDLDSKIDEKVAEISRRLNEYAVRKKLASSMASNL 610
Query: 466 IADNKLKKSSSCSTIYLDDSTVSQPNLKNTVRCVALA 576
DNK S CS + SQP R + A
Sbjct: 611 NGDNKSLSYSRCSLTSTATNATSQPKRSRKHRAIKQA 647
>Z48716-7|CAA88602.3| 931|Caenorhabditis elegans Hypothetical
protein F59B10.1 protein.
Length = 931
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 2/97 (2%)
Frame = +1
Query: 292 DYLP--EGEVSSNNIQHISEREPDDGDIDPSQDPMAGTIFMERSKASIENGMTRKRSQHQ 465
DYL EG V + + GD+D D I ++ ++ + + +
Sbjct: 551 DYLTIDEGRVFYETVMATQQLCRMTGDLDSKIDEKVAEISRRLNEYAVRKKLASSMASNL 610
Query: 466 IADNKLKKSSSCSTIYLDDSTVSQPNLKNTVRCVALA 576
DNK S CS + SQP R + A
Sbjct: 611 NGDNKSLSYSRCSLTSTATNATSQPKRSRKHRAIKQA 647
>U53147-2|AAA96114.2| 935|Caenorhabditis elegans Hypothetical protein
C01B7.1a protein.
Length = 935
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 256 PSPIRKDIVKLEDYLPEGEVSSNNIQHISEREPDDGDIDPSQDP 387
P P R DI KL+ G++ I+ + E +DG +PS+ P
Sbjct: 879 PLPTRSDIEKLQILASGGDLKIGGIEKYLKEECEDG--EPSEAP 920
>U29612-5|AAA68800.2| 409|Caenorhabditis elegans Inositol
polyphosphate 5-phosphataseprotein 5 protein.
Length = 409
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 4/111 (3%)
Frame = +1
Query: 394 GTIFMERSKASIENGMTRKRSQHQIADNK----LKKSSSCSTIYLDDSTVSQPNLKNTVR 561
G + S N +T + +QH +AD + L S L T NL+ TV
Sbjct: 223 GDLNFRLDSRSFLNRLTERTAQHPVADQEQMGSLADGLQASAANLQVITHPSENLRRTVS 282
Query: 562 CVALAIYYHIKNRMSERRLDIFDEKLHPLSKEGVSDDYDKYNPEHKQIYKF 714
+ + + L I +K + + + DD+ Y + K+ F
Sbjct: 283 AIEFRRESDSDDSQNSCVLRIEKKKFDYFNHKKLLDDWRSYRDDDKETENF 333
>AL110499-4|CAD30454.1| 197|Caenorhabditis elegans Hypothetical
protein Y62F5A.9 protein.
Length = 197
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 622 IFDEKLHPLSKEGVSDDYDKYNPEHKQIYKFVRTL 726
I + K+H LSK+ VS+DYD+ + + + KF+ +L
Sbjct: 51 IDEAKIHQLSKDMVSNDYDE-DKVQRVLDKFMESL 84
>AF411588-1|AAL72637.1| 400|Caenorhabditis elegans inositol
polyphosphate 5-phosphatasetype I protein.
Length = 400
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 4/111 (3%)
Frame = +1
Query: 394 GTIFMERSKASIENGMTRKRSQHQIADNK----LKKSSSCSTIYLDDSTVSQPNLKNTVR 561
G + S N +T + +QH +AD + L S L T NL+ TV
Sbjct: 223 GDLNFRLDSRSFLNRLTERTAQHPVADQEQMGSLADGLQASAANLQVITHPSENLRRTVS 282
Query: 562 CVALAIYYHIKNRMSERRLDIFDEKLHPLSKEGVSDDYDKYNPEHKQIYKF 714
+ + + L I +K + + + DD+ Y + K+ F
Sbjct: 283 AIEFRRESDSDDSQNSCVLRIEKKKFDYFNHKKLLDDWRSYRDDDKETENF 333
>AF353303-1|AAK32717.1| 367|Caenorhabditis elegans GATA-like
transcription factorELT-6 protein.
Length = 367
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 469 ADNKLKKSSSCSTIYLDDSTVSQPNLKNTVRCVALAIYY--HIKNRMSERRLDIFDEKLH 642
A++ + K S+CSTI +T + +L+ + C A +YY H +R R D ++
Sbjct: 258 ANSSISKCSNCSTI---KTTAWRRDLEGKLVCNACGLYYRLHRTHRPVHMRKDFIQQRFR 314
Query: 643 PLSKE 657
+E
Sbjct: 315 RRMRE 319
>AF100657-1|AAC68957.3| 367|Caenorhabditis elegans Erythroid-like
transcription factorfamily protein 6 protein.
Length = 367
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 469 ADNKLKKSSSCSTIYLDDSTVSQPNLKNTVRCVALAIYY--HIKNRMSERRLDIFDEKLH 642
A++ + K S+CSTI +T + +L+ + C A +YY H +R R D ++
Sbjct: 258 ANSSISKCSNCSTI---KTTAWRRDLEGKLVCNACGLYYRLHRTHRPVHMRKDFIQQRFR 314
Query: 643 PLSKE 657
+E
Sbjct: 315 RRMRE 319
>Z81079-5|CAB03082.2| 505|Caenorhabditis elegans Hypothetical
protein F39H11.2 protein.
Length = 505
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +1
Query: 253 SPSPIRKDIVKLEDYLPEGEVSSNNIQHISEREPDDGDID 372
SP PI I ++ D PEG ++N E PDDGDID
Sbjct: 231 SPEPIPVKI-EVPDVPPEGTSAANE-----EPMPDDGDID 264
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 360 WRHRSIARSDGWHHF 404
WRH S +D WHHF
Sbjct: 794 WRHFSPRHADTWHHF 808
>AJ238443-1|CAB41469.1| 454|Caenorhabditis elegans TBP-like factor
protein.
Length = 454
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +1
Query: 253 SPSPIRKDIVKLEDYLPEGEVSSNNIQHISEREPDDGDID 372
SP PI I ++ D PEG ++N E PDDGDID
Sbjct: 231 SPEPIPVKI-EVPDVPPEGTSAANE-----EPMPDDGDID 264
>AF228692-1|AAF59926.1| 505|Caenorhabditis elegans TBP-like factor
protein.
Length = 505
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +1
Query: 253 SPSPIRKDIVKLEDYLPEGEVSSNNIQHISEREPDDGDID 372
SP PI I ++ D PEG ++N E PDDGDID
Sbjct: 231 SPEPIPVKI-EVPDVPPEGTSAANE-----EPMPDDGDID 264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,315,561
Number of Sequences: 27780
Number of extensions: 350718
Number of successful extensions: 1009
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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