BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23n16
(206 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029727-1|ABL75784.1| 288|Drosophila melanogaster IP17596p pro... 29 1.2
AF129420-1|AAD29408.1| 1685|Drosophila melanogaster AXO protein. 27 3.6
DQ231603-1|ABA71709.1| 337|Drosophila melanogaster male accesso... 26 8.3
BT022675-1|AAY55091.1| 341|Drosophila melanogaster IP07668p pro... 26 8.3
BT022547-1|AAY54963.1| 344|Drosophila melanogaster IP07868p pro... 26 8.3
BT022298-1|AAY54714.1| 209|Drosophila melanogaster IP04662p pro... 26 8.3
AE014134-891|ABI31293.1| 338|Drosophila melanogaster CG14034-PB... 26 8.3
>BT029727-1|ABL75784.1| 288|Drosophila melanogaster IP17596p
protein.
Length = 288
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 131 STDRNVRSKCRCSNVSCSSHYDAQLTA 51
S + N+ + C C+N+SCSS +T+
Sbjct: 87 SNNSNIVTNCSCNNISCSSSNTQPITS 113
>AF129420-1|AAD29408.1| 1685|Drosophila melanogaster AXO protein.
Length = 1685
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 135 CLHGPQCAFEMSMFKCVLQFTL 70
C +G QC S FKCVLQ +L
Sbjct: 1264 CRNGAQCKEFWSSFKCVLQQSL 1285
>DQ231603-1|ABA71709.1| 337|Drosophila melanogaster male accessory
gland protein protein.
Length = 337
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 89 HLNIDISNAHCGPWRHIQDHSC 154
+LN+ +S +CGP ++ H C
Sbjct: 220 YLNMGVSQPNCGPINKMETHFC 241
>BT022675-1|AAY55091.1| 341|Drosophila melanogaster IP07668p
protein.
Length = 341
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 89 HLNIDISNAHCGPWRHIQDHSC 154
+LN+ +S +CGP ++ H C
Sbjct: 224 YLNMGVSQPNCGPINKMETHFC 245
>BT022547-1|AAY54963.1| 344|Drosophila melanogaster IP07868p
protein.
Length = 344
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 89 HLNIDISNAHCGPWRHIQDHSC 154
+LN+ +S +CGP ++ H C
Sbjct: 227 YLNMGVSQPNCGPINKMETHFC 248
>BT022298-1|AAY54714.1| 209|Drosophila melanogaster IP04662p
protein.
Length = 209
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 161 PSDRSGPGCVSTDRNVRSKCRCSNVSCSS 75
P++ + PG S R +RS CR S S S
Sbjct: 11 PNENTHPGPASCARCIRSSCRPSATSAPS 39
>AE014134-891|ABI31293.1| 338|Drosophila melanogaster CG14034-PB
protein.
Length = 338
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 89 HLNIDISNAHCGPWRHIQDHSC 154
+LN+ +S +CGP ++ H C
Sbjct: 221 YLNMGVSQPNCGPINKMETHFC 242
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,418,557
Number of Sequences: 53049
Number of extensions: 157686
Number of successful extensions: 430
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 24,988,368
effective HSP length: 48
effective length of database: 22,442,016
effective search space used: 448840320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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