Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23n07
(361 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.10 |ppk33||serine/threonine protein kinase Ppk33 |Schizo... 28 0.50
SPAC31G5.08 |ups1|ups|uroporphyrinogen-III synthase Ups1|Schizos... 27 0.67
SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase |S... 26 1.5
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 26 1.5
SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces pom... 26 1.5
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 26 2.0
SPCC663.13c |||N-acetyltransferase |Schizosaccharomyces pombe|ch... 25 2.7
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 25 3.5
SPBC428.01c |nup107|SPBC582.11c|nucleoporin Nup107|Schizosacchar... 25 3.5
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 25 4.7
SPBC1778.02 |rap1||telomere binding protein Rap1|Schizosaccharom... 25 4.7
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 25 4.7
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 24 8.2
SPAPB8E5.03 |mae1||malic acid transport protein Mae1 |Schizosacc... 24 8.2
SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|ch... 24 8.2
>SPCC162.10 |ppk33||serine/threonine protein kinase Ppk33
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 27.9 bits (59), Expect = 0.50
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +1
Query: 154 AIQCINEKLYDKHYKIRKIAKRVI 225
A++CIN+K +D+H KI+K+ V+
Sbjct: 57 ALKCINKKKHDEH-KIKKLRNEVL 79
>SPAC31G5.08 |ups1|ups|uroporphyrinogen-III synthase
Ups1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 251
Score = 27.5 bits (58), Expect = 0.67
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = -2
Query: 81 KMSLLAQNKSE-FDAVVDAFRKYGQ 10
K +LL + KS+ FD V+AF KYG+
Sbjct: 2 KTALLLKTKSQPFDPYVEAFEKYGR 26
>SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 26.2 bits (55), Expect = 1.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 315 KYILITIIHVFILQYFLYNLF 253
+Y+L+ II + L YF+YN F
Sbjct: 5 EYVLLVIILILSLCYFIYNNF 25
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 26.2 bits (55), Expect = 1.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -2
Query: 279 LQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFF 172
L F LF + T+HV F + F F+ +FF
Sbjct: 246 LAAFYRGLFPSLFGTLHVGIQFPLYEYFKSFLDDFF 281
>SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 431
Score = 26.2 bits (55), Expect = 1.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -2
Query: 354 FTIKLFYILFIRNKYILITIIHVFILQYFLYNLFNYIMSTI 232
F I LFY LF + + + TII +L F + I S I
Sbjct: 148 FVISLFYSLFHAHPFRINTIIPALVLPIFPCMICGVIASAI 188
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 25.8 bits (54), Expect = 2.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 339 FYILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVD 223
F ++FI +YI I I V +L + LFN +S + D
Sbjct: 1432 FKLVFIEMQYINIISIIVLVLTSLAWFLFNIFISEHYPD 1470
>SPCC663.13c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 144
Score = 25.4 bits (53), Expect = 2.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 127 DGVHPNPLLAIQCINEKLYD 186
D ++PN L ++ INEK +D
Sbjct: 5 DAINPNNLKILEVINEKCFD 24
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 25.0 bits (52), Expect = 3.5
Identities = 13/58 (22%), Positives = 26/58 (44%)
Frame = -2
Query: 297 IIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVHTVI 124
+I + I ++Y F YI + IH + +F F+ F + +W H+++
Sbjct: 281 VISLIIAPLWIYFTFKYITTCIHANIDIVHFYLETPFLAGIFSSIF---FWVWCHSLL 335
>SPBC428.01c |nup107|SPBC582.11c|nucleoporin
Nup107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 794
Score = 25.0 bits (52), Expect = 3.5
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 26 NASTTASNSLLFWAKSDIFASEKCALKTT 112
+A T AS S W K FAS KC T
Sbjct: 663 SAVTKASTSYKVWKKKLNFASRKCVKSFT 691
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 24.6 bits (51), Expect = 4.7
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 258 LFNYIMSTIHVDYTF 214
LFNY++S IH D ++
Sbjct: 527 LFNYVLSLIHFDMSY 541
>SPBC1778.02 |rap1||telomere binding protein
Rap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 693
Score = 24.6 bits (51), Expect = 4.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 79 FRKRKMRFEDDMEVLYDGVHPNPL 150
FRKR++ +D ++L D VH N +
Sbjct: 119 FRKRELFTLEDEKILIDHVHKNDI 142
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 24.6 bits (51), Expect = 4.7
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = -2
Query: 270 FLYNLFNYIMSTIHVDYTFSYFSNFVMFI 184
F+ + N+ +I+ +Y+F F+N +M +
Sbjct: 437 FILDSQNFFFESINTEYSFIIFTNLLMHL 465
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 23.8 bits (49), Expect = 8.2
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = -2
Query: 348 IKLFYILFIRNKYILITIIHVFILQYFLYNLFN---YIMSTIHVDYTFSYFSNFVMFIVE 178
I FY R + I+ I VF+ Y++ +++ M + H + ++ F ++F V
Sbjct: 2172 IPAFYRSLFRRRLIMWFFISVFLQNYWMSSVYGRSWAFMWSAHNVHKWAMFLLVILFYVA 2231
Query: 177 FFV 169
++
Sbjct: 2232 IWI 2234
>SPAPB8E5.03 |mae1||malic acid transport protein Mae1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 23.8 bits (49), Expect = 8.2
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -2
Query: 288 VFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNT 163
V+ILQ FL++LF M + Y + ++ + + F+ T
Sbjct: 69 VYILQIFLFSLFGSCMLFRFIKYPSTIKDSWNHHLEKLFIAT 110
>SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 525
Score = 23.8 bits (49), Expect = 8.2
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 225 DYTFSYFSNFVMFIVEFFVNTLNCQQGIWVHTVIEHF-HVVFKAHFSLAKMSLLA 64
D F +F +F E V++L G +V+ ++ F ++ +FS+ KMS +A
Sbjct: 292 DTYFVFFMAIKIFFSEPIVSSLGIYNG-FVNGLLYFFLQAIWPVYFSIYKMSDMA 345
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,385,851
Number of Sequences: 5004
Number of extensions: 26697
Number of successful extensions: 95
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 110009772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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