Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23n07
(361 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58749-2|AAK18876.1| 355|Caenorhabditis elegans Hypothetical pr... 33 0.079
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 31 0.24
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 31 0.24
Z81533-13|CAB04336.2| 323|Caenorhabditis elegans Hypothetical p... 30 0.56
AL023835-6|CAA19483.1| 144|Caenorhabditis elegans Hypothetical ... 30 0.56
Z81545-8|CAB04444.1| 327|Caenorhabditis elegans Hypothetical pr... 29 0.74
AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical... 29 0.98
AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signali... 29 0.98
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 2.3
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 2.3
U40800-2|AAA81489.2| 137|Caenorhabditis elegans Hypothetical pr... 28 2.3
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 2.3
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 2.3
AF101316-4|AAC69229.2| 296|Caenorhabditis elegans Serpentine re... 28 2.3
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 27 3.0
Z82261-5|CAH60756.1| 304|Caenorhabditis elegans Hypothetical pr... 27 3.9
AF016419-1|AAG24051.1| 499|Caenorhabditis elegans Hypothetical ... 27 3.9
AF000197-3|AAB52898.2| 109|Caenorhabditis elegans Hypothetical ... 27 3.9
Z82284-2|CAB05290.1| 402|Caenorhabditis elegans Hypothetical pr... 27 5.2
AL132948-24|CAD31826.1| 135|Caenorhabditis elegans Hypothetical... 27 5.2
Z82086-5|CAB04992.2| 325|Caenorhabditis elegans Hypothetical pr... 26 6.9
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 26 6.9
Z78200-6|CAB01585.2| 524|Caenorhabditis elegans Hypothetical pr... 26 6.9
Z72512-1|CAA96663.2| 326|Caenorhabditis elegans Hypothetical pr... 26 6.9
U80028-9|AAN73867.1| 372|Caenorhabditis elegans Serpentine rece... 26 6.9
AF067609-5|AAC17534.1| 644|Caenorhabditis elegans Hypothetical ... 26 6.9
AF022985-3|AAB69970.1| 355|Caenorhabditis elegans Hypothetical ... 26 6.9
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 26 9.1
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z83108-2|CAB05510.1| 820|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z82059-2|CAB04876.3| 557|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z70208-8|CAA94143.1| 196|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 26 9.1
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 26 9.1
AF016419-3|AAG24048.1| 529|Caenorhabditis elegans Hypothetical ... 26 9.1
AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical ... 26 9.1
>U58749-2|AAK18876.1| 355|Caenorhabditis elegans Hypothetical
protein B0496.5 protein.
Length = 355
Score = 32.7 bits (71), Expect = 0.079
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = -2
Query: 312 YILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVH 133
+++ +HV +L F + I+ + +SYF N+ +FI+ F +T QG WV
Sbjct: 88 FLITDYLHVLLLAAFAIDRLIQIIFPVSYGKFYSYFINWKLFILLIFASTGLSVQG-WVF 146
Query: 132 TVIEHFH 112
+ F+
Sbjct: 147 PLDSRFN 153
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 31.1 bits (67), Expect = 0.24
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 1 HQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHP-NPLLAIQCINEK 177
H HL+ + + KL + E F+ +++ F D + LYDG PL+A N+K
Sbjct: 626 HSHLSAYMLFLCTAEKLPWFGDAENMFKLKEVFFNDPLNYLYDGCADFVPLVACFIANKK 685
Query: 178 LYDKHYKIRKIAKRVI 225
L + + + K++K +I
Sbjct: 686 LTYETF-MEKMSKYLI 700
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 31.1 bits (67), Expect = 0.24
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 1 HQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHP-NPLLAIQCINEK 177
H HL+ + + KL + E F+ +++ F D + LYDG PL+A N+K
Sbjct: 626 HSHLSAYMLFLCTAEKLPWFGDAENMFKLKEVFFNDPLNYLYDGCADFVPLVACFIANKK 685
Query: 178 LYDKHYKIRKIAKRVI 225
L + + + K++K +I
Sbjct: 686 LTYETF-MEKMSKYLI 700
>Z81533-13|CAB04336.2| 323|Caenorhabditis elegans Hypothetical
protein F36G9.6 protein.
Length = 323
Score = 29.9 bits (64), Expect = 0.56
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -2
Query: 357 FFTIKLFYILFIRNKYILITIIHVF-ILQYFLYNLFNYIMST-IHVDYTFSYFSNFVMFI 184
FFT+ + + F+ YI T++ VF IL FL + ++ + T S+F + + FI
Sbjct: 23 FFTVPVL-LAFVPILYIPATVVVVFHILSKFLTEYYERNVNVQLFGVITLSHFMSLLFFI 81
Query: 183 VEFF 172
+FF
Sbjct: 82 ADFF 85
>AL023835-6|CAA19483.1| 144|Caenorhabditis elegans Hypothetical
protein Y37A1B.6 protein.
Length = 144
Score = 29.9 bits (64), Expect = 0.56
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = -2
Query: 291 HVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVN---TLNCQQGIWVHTVIE 121
+ F+L YF N+FN + IH TF ++F F++E + + N + ++ H+V
Sbjct: 23 YCFMLHYFGKNMFNSNFADIH--NTFLMVASFEQFVLEGYYSIDRASNFPENLYFHSVTG 80
Query: 120 HFHVVFKAH 94
+V K H
Sbjct: 81 --KIVHKPH 87
>Z81545-8|CAB04444.1| 327|Caenorhabditis elegans Hypothetical
protein F49H6.11 protein.
Length = 327
Score = 29.5 bits (63), Expect = 0.74
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -2
Query: 354 FTIKLFYILFIRNKYILITIIHVFILQYFLYNL-FNYIMSTIHVDYTFSYFSNF-VMFIV 181
FT+ L YIL I + + + + I+ Y Y ++++ S +Y Y NF V F++
Sbjct: 104 FTLFLIYILHILQQTFHLLLFSLAIMSYLKYQFPYDFLYSQ---NYISKYVRNFNVFFVL 160
Query: 180 EFFV 169
+ FV
Sbjct: 161 KDFV 164
>AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical
protein Y75B8A.34 protein.
Length = 344
Score = 29.1 bits (62), Expect = 0.98
Identities = 11/44 (25%), Positives = 27/44 (61%)
Frame = -2
Query: 312 YILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIV 181
YI+ ++ FI+ + F +I ++++DY+ ++FS + F++
Sbjct: 98 YIISSLASAFIIDSRTLSGFYFIQPSLYLDYSSNFFSVAITFLM 141
>AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signaling
pathway homologprotein 1 protein.
Length = 1451
Score = 29.1 bits (62), Expect = 0.98
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 22 SERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVL 123
S++ D +K+A+ +G+E ++R+ EDD E L
Sbjct: 182 SQKAKDEMKMAYQVGREEALQQRRNDLEDDEENL 215
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 27.9 bits (59), Expect = 2.3
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = -2
Query: 336 YILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTF 214
++ + + ++ ++ VFI +YN N + IH D F
Sbjct: 12 FVAYSAVTFSVVAVVSVFITLPMVYNYVNNVKKQIHTDVNF 52
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 27.9 bits (59), Expect = 2.3
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = -2
Query: 336 YILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTF 214
++ + + ++ ++ VFI +YN N + IH D F
Sbjct: 12 FVAYSAVTFSVVAVVSVFITLPMVYNYVNNVKKQIHTDVNF 52
>U40800-2|AAA81489.2| 137|Caenorhabditis elegans Hypothetical
protein D2096.5 protein.
Length = 137
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -2
Query: 294 IHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTL 160
+HV +L F++ LF+ + + + F+ F + + V+FFV L
Sbjct: 4 LHVSLLSVFIFLLFSSEVEALVTTFHFNGFLSCGLSTVDFFVQKL 48
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 27.9 bits (59), Expect = 2.3
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = -2
Query: 336 YILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTF 214
++ + + ++ ++ VFI +YN N + IH D F
Sbjct: 12 FVAYSAVTFSVVAVVSVFITLPMVYNYVNNVKKQIHTDVNF 52
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 27.9 bits (59), Expect = 2.3
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = -2
Query: 336 YILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTF 214
++ + + ++ ++ VFI +YN N + IH D F
Sbjct: 12 FVAYSAVTFSVVAVVSVFITLPMVYNYVNNVKKQIHTDVNF 52
>AF101316-4|AAC69229.2| 296|Caenorhabditis elegans Serpentine
receptor, class sx protein8 protein.
Length = 296
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -2
Query: 348 IKLFYILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFI 184
+K I+FI + Y+ + +I+ FIL + + N ++ I + S+ F I
Sbjct: 204 LKFSAIIFIISNYLSVFVINAFILYGYAGDELNGVIGNISIFSMISFTHTFYTII 258
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 130 RHRALPCRLQSAFFACENVALGPKQKRV*CGRRCVPKIWPN 8
R A+ L S+F E A ++KR CG C P++ P+
Sbjct: 2 RFIAIAALLASSFLLIEATATSTREKRQSCG--CAPRVQPS 40
>Z82261-5|CAH60756.1| 304|Caenorhabditis elegans Hypothetical
protein C35D6.9a protein.
Length = 304
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = -2
Query: 348 IKLFYILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTFS 211
I +F +F+ K ++I+ +F +N+F+ + + +HV FS
Sbjct: 152 IFIFVFIFVDAKEESNGFKTIYIVIFFTFNIFSILSAILHVPMYFS 197
>AF016419-1|AAG24051.1| 499|Caenorhabditis elegans Hypothetical
protein F07G11.4 protein.
Length = 499
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 151 LAIQCINEKLYDKHYKIRK 207
L ++C NEK YD +Y RK
Sbjct: 425 LVLKCYNEKYYDLYYSNRK 443
>AF000197-3|AAB52898.2| 109|Caenorhabditis elegans Hypothetical
protein T21G5.2 protein.
Length = 109
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 315 KYILITIIHVFILQYFLYNLFNYI-MSTIHVDYTFSYFSNF 196
++++ T IH+F L+N F +I +S V +FS F F
Sbjct: 35 QFVIFTYIHIFSYLCVLFNYFLFIDLSISTVIVSFSRFIKF 75
>Z82284-2|CAB05290.1| 402|Caenorhabditis elegans Hypothetical
protein T27E7.3 protein.
Length = 402
Score = 26.6 bits (56), Expect = 5.2
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -2
Query: 351 TIKLFYILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMF 187
TIK YI I Y+L ++ + YF+ ++ + T ++ FS S F +F
Sbjct: 223 TIKTLYICCIIRDYVLSPVVACVSVIYFIGSI---SIETFSLETLFSLKSQFTIF 274
>AL132948-24|CAD31826.1| 135|Caenorhabditis elegans Hypothetical
protein Y39B6A.32 protein.
Length = 135
Score = 26.6 bits (56), Expect = 5.2
Identities = 10/36 (27%), Positives = 13/36 (36%)
Frame = +2
Query: 50 SLLFWAKSDIFASEKCALKTTWKCSMTVCTQIPCWQ 157
S FW IF L W C+ + CW+
Sbjct: 26 SFFFWIPIAIFVKSNLLLTHFWCCTRNALAILVCWR 61
>Z82086-5|CAB04992.2| 325|Caenorhabditis elegans Hypothetical
protein ZK228.5 protein.
Length = 325
Score = 26.2 bits (55), Expect = 6.9
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = -2
Query: 324 IRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQG 145
++ ++ + I VFI F+ YI+ +++DY ++ +N I F L+
Sbjct: 232 LQKQFFVALCIQVFIPLVFISIPVAYIILAVYLDY-YNQAANNSALIAIAFHGILSTLTM 290
Query: 144 IWVHTVIEHFHVVF 103
+ VHT H + F
Sbjct: 291 LIVHTPYRHATLEF 304
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 26.2 bits (55), Expect = 6.9
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 232 DCTHNVVKEVIQEVL*NKNMYNSY*YVFIS 321
+C+H++ K IQ L +NMY+ + ++S
Sbjct: 221 NCSHDIPKTAIQMALDLRNMYSDFPLPYLS 250
>Z78200-6|CAB01585.2| 524|Caenorhabditis elegans Hypothetical
protein T04H1.8 protein.
Length = 524
Score = 26.2 bits (55), Expect = 6.9
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = -2
Query: 261 NLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVHTVIEHFHVVFKAHF 91
N N ++STI Y+ + NF F + NTL + V F VF HF
Sbjct: 452 NAENLLISTIEATYSTEFPPNFSKFPKNYHPNTLVRLIDSSIALVFMLFIFVFVNHF 508
>Z72512-1|CAA96663.2| 326|Caenorhabditis elegans Hypothetical
protein R07B5.3 protein.
Length = 326
Score = 26.2 bits (55), Expect = 6.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -2
Query: 357 FFTIKLFYILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNF 196
F ++++ ++FI Y+L+ I IL YF L + S + + YFSN+
Sbjct: 69 FIWMQIWNLVFIFFDYVLVRIPSTTILTYFCATL-DPAESIVPLLVAVYYFSNY 121
>U80028-9|AAN73867.1| 372|Caenorhabditis elegans Serpentine
receptor, class w protein117 protein.
Length = 372
Score = 26.2 bits (55), Expect = 6.9
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -2
Query: 309 ILITIIHVFIL--QYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNT 163
ILI I+HVFIL + + N +M+ + + F F+NF + F NT
Sbjct: 50 ILINIVHVFILTRKPMRTSSINILMAAVAL---FDIFTNFQQIEIIFERNT 97
>AF067609-5|AAC17534.1| 644|Caenorhabditis elegans Hypothetical
protein C23H5.7 protein.
Length = 644
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -2
Query: 303 ITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNF 196
I + H YFL++L+ I ++ FSY+ F
Sbjct: 183 IVLFHWNACLYFLFSLYEGITEESQTEFGFSYYKVF 218
>AF022985-3|AAB69970.1| 355|Caenorhabditis elegans Hypothetical
protein T15B7.11 protein.
Length = 355
Score = 26.2 bits (55), Expect = 6.9
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -2
Query: 321 RNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFI-VEFFVNT 163
R+ ++ TI+ VF++ +F+ I +DY +Y+ N +F+ V F NT
Sbjct: 260 RSSQLIQTILIVFLITEVPQGVFSIIGGIEVIDY-LNYYQNLTIFMNVLSFFNT 312
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = -2
Query: 342 LFYILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFV 169
LF +R K +++T +++++ +YN +S + VD +S+ N + + +FV
Sbjct: 350 LFKTPNLRRKTLIVT--YIWVMNAIIYNGLTLNVSNLPVDDYWSFIINGAVELPGYFV 405
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = -2
Query: 342 LFYILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFV 169
LF +R K +++T +++++ +YN +S + VD +S+ N + + +FV
Sbjct: 333 LFKTPNLRRKTLIVT--YIWVMNAIIYNGLTLNVSNLPVDDYWSFIINGAVELPGYFV 388
>Z83108-2|CAB05510.1| 820|Caenorhabditis elegans Hypothetical
protein F44E5.2 protein.
Length = 820
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 300 TIIHVFILQYFLYNLFNYIMSTIHVD 223
T+ H + L+ LFN+I S+ H+D
Sbjct: 314 TLKHDVFMSQCLHALFNFIKSSYHID 339
>Z82059-2|CAB04876.3| 557|Caenorhabditis elegans Hypothetical
protein T27E9.5 protein.
Length = 557
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 38 TASNSLLFWAKSDIFASEKCALKTTW 115
T+ ++L WA S I + C L +TW
Sbjct: 483 TSGWNMLLWAMSIIIGTISCILASTW 508
>Z70208-8|CAA94143.1| 196|Caenorhabditis elegans Hypothetical
protein F54B11.8 protein.
Length = 196
Score = 25.8 bits (54), Expect = 9.1
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Frame = +1
Query: 37 DRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCIN------EKLYDKHYK 198
D K+A + R +R++ M V Y HP L + C +L YK
Sbjct: 40 DSFKIAILNAAARARATGNIRYDSRMTV-YS--HPATLQCVDCEEGVKKRFTQLLSSMYK 96
Query: 199 IRKIAKRVIDVDCTHNVVKEVIQ 267
I K ++ I++DCT +++
Sbjct: 97 ISKDSEGYINLDCTQTAAMYLLK 119
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical protein
F39B1.1 protein.
Length = 1607
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 297 IIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFV 193
IIHV Q FL LFN + H D +++F + +
Sbjct: 1424 IIHV---QKFLIYLFNQVDEICHCDLVYTFFHSIL 1455
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical protein
F39B1.1 protein.
Length = 1607
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 297 IIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFV 193
IIHV Q FL LFN + H D +++F + +
Sbjct: 1424 IIHV---QKFLIYLFNQVDEICHCDLVYTFFHSIL 1455
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = -2
Query: 342 LFYILFIRNKYILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFV 169
LF +R K +++T +++++ +YN +S + VD +S+ N + + +FV
Sbjct: 333 LFKTPNLRRKTLIVT--YIWVMNAIIYNGLTLNVSNLPVDDYWSFIINGAVELPGYFV 388
>AF016419-3|AAG24048.1| 529|Caenorhabditis elegans Hypothetical
protein F07G11.3 protein.
Length = 529
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 151 LAIQCINEKLYDKHYKIRK 207
L ++C NEK YD Y RK
Sbjct: 455 LVLKCYNEKYYDLFYNNRK 473
>AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical
protein F55A3.1 protein.
Length = 958
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -2
Query: 333 ILFIRNKYILITIIHVFI--LQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEF 175
++F+ + + +I++ +F YF + + N+ +S I + SYF + V ++ +
Sbjct: 413 LIFLEHVFWVISLNTLFTATFAYFPFRIGNWFLSVIGLHGKISYFPSIVAMLLGY 467
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,706,844
Number of Sequences: 27780
Number of extensions: 153666
Number of successful extensions: 587
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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