Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23n04
(748 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022858-1|AAH22858.1| 125|Homo sapiens ACN9 homolog (S. cerevi... 94 6e-19
BC020621-1|AAH20621.1| 125|Homo sapiens ACN9 homolog (S. cerevi... 94 6e-19
AF201933-1|AAF86869.1| 125|Homo sapiens DC11 protein. 94 6e-19
EF695416-1|ABS01454.1| 222|Homo sapiens extraembryonic spermato... 36 0.12
BC034775-1|AAH34775.1| 295|Homo sapiens proline rich region 18 ... 31 4.4
U73778-1|AAC51244.1| 3063|Homo sapiens collagen type XII alpha-1... 31 5.8
>BC022858-1|AAH22858.1| 125|Homo sapiens ACN9 homolog (S.
cerevisiae) protein.
Length = 125
Score = 93.9 bits (223), Expect = 6e-19
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Frame = +1
Query: 244 HVSRVRRLYKLIFRVHRGLPPELRVLGDNYARDEFKRHKKCNKDEAKIFLNEWTDYAINL 423
HVSRVR LYK + ++HR LPP+L+ LGD Y +DEF+RHK DEA+ FL EW YA L
Sbjct: 5 HVSRVRALYKRVLQLHRVLPPDLKSLGDQYVKDEFRRHKTVGSDEAQRFLQEWEVYATAL 64
Query: 424 AKQMKPLHQ--AKNKMVGEYLDPSLLDHMSDEQIVQLYELHKAA 549
+Q Q G +L L+ DEQI QL EL + A
Sbjct: 65 LQQANENRQNSTGKACFGTFLPEEKLNDFRDEQIGQLQELMQEA 108
>BC020621-1|AAH20621.1| 125|Homo sapiens ACN9 homolog (S.
cerevisiae) protein.
Length = 125
Score = 93.9 bits (223), Expect = 6e-19
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Frame = +1
Query: 244 HVSRVRRLYKLIFRVHRGLPPELRVLGDNYARDEFKRHKKCNKDEAKIFLNEWTDYAINL 423
HVSRVR LYK + ++HR LPP+L+ LGD Y +DEF+RHK DEA+ FL EW YA L
Sbjct: 5 HVSRVRALYKRVLQLHRVLPPDLKSLGDQYVKDEFRRHKTVGSDEAQRFLQEWEVYATAL 64
Query: 424 AKQMKPLHQ--AKNKMVGEYLDPSLLDHMSDEQIVQLYELHKAA 549
+Q Q G +L L+ DEQI QL EL + A
Sbjct: 65 LQQANENRQNSTGKACFGTFLPEEKLNDFRDEQIGQLQELMQEA 108
>AF201933-1|AAF86869.1| 125|Homo sapiens DC11 protein.
Length = 125
Score = 93.9 bits (223), Expect = 6e-19
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Frame = +1
Query: 244 HVSRVRRLYKLIFRVHRGLPPELRVLGDNYARDEFKRHKKCNKDEAKIFLNEWTDYAINL 423
HVSRVR LYK + ++HR LPP+L+ LGD Y +DEF+RHK DEA+ FL EW YA L
Sbjct: 5 HVSRVRALYKRVLQLHRVLPPDLKSLGDQYVKDEFRRHKTVGSDEAQRFLQEWEVYATAL 64
Query: 424 AKQMKPLHQ--AKNKMVGEYLDPSLLDHMSDEQIVQLYELHKAA 549
+Q Q G +L L+ DEQI QL EL + A
Sbjct: 65 LQQANENRQNSTGKACFGTFLPEEKLNDFRDEQIGQLQELMQEA 108
>EF695416-1|ABS01454.1| 222|Homo sapiens extraembryonic
spermatogenesis homeobox 1-like protein protein.
Length = 222
Score = 36.3 bits (80), Expect = 0.12
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -1
Query: 343 RPWRSCLPGHGVRAASPGEPGRSICRAGEP 254
RPWR C PG R PG P R +C G P
Sbjct: 123 RPWRLCQPGRPWRLCHPGRPWR-VCHPGRP 151
Score = 36.3 bits (80), Expect = 0.12
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -1
Query: 343 RPWRSCLPGHGVRAASPGEPGRSICRAGEP 254
RPWR C PG R PG P R +C G P
Sbjct: 132 RPWRLCHPGRPWRVCHPGRPWR-VCHPGRP 160
Score = 36.3 bits (80), Expect = 0.12
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -1
Query: 343 RPWRSCLPGHGVRAASPGEPGRSICRAGEP 254
RPWR C PG R PG P R +C G P
Sbjct: 141 RPWRVCHPGRPWRVCHPGRPWR-VCHPGRP 169
Score = 35.9 bits (79), Expect = 0.15
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -1
Query: 343 RPWRSCLPGHGVRAASPGEPGRSICRAGEP 254
RPWR C PG R PG P R +C G P
Sbjct: 150 RPWRVCHPGRPWRVCHPGRPWR-LCHPGRP 178
Score = 35.5 bits (78), Expect = 0.20
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -1
Query: 343 RPWRSCLPGHGVRAASPGEPGRSICRAGEP 254
RPWR C PG R PG P R +C G P
Sbjct: 159 RPWRVCHPGRPWRLCHPGRPWR-LCHPGRP 187
Score = 32.7 bits (71), Expect = 1.4
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -1
Query: 343 RPWRSCLPGHGVRAASPGEPGRSICRAG 260
RPWR C PG R PG P R +C G
Sbjct: 168 RPWRLCHPGRPWRLCHPGRPWR-LCHPG 194
>BC034775-1|AAH34775.1| 295|Homo sapiens proline rich region 18
protein.
Length = 295
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 255 GSPALQIDLPGSPGLAARTPCPGRQLRQGRVQATQ 359
G PA D P + G R P PG QL G +Q Q
Sbjct: 189 GGPASDPDAPPTAGQGRRAPPPGAQLLHGGLQVPQ 223
>U73778-1|AAC51244.1| 3063|Homo sapiens collagen type XII alpha-1
protein.
Length = 3063
Score = 30.7 bits (66), Expect = 5.8
Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 9/84 (10%)
Frame = -1
Query: 670 CSALDRELYGKRSRAFNATAHAARRRHGN*IPMTPYQAPMTPPY---------GVRTTEQ 518
C + R + G SR + RR N IP T Y+ + P Y G TE+
Sbjct: 753 CRIIYRPVAGGESREVTTPPNQRRRTLENLIPDTKYEVSVIPEYFSGPGTPLTGNAATEE 812
Query: 517 SVHRSCGLEGSDPSTHRPFCSWLG 446
L SDP+T SW G
Sbjct: 813 VRGNPRDLRVSDPTTSTMKLSWSG 836
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,731,979
Number of Sequences: 237096
Number of extensions: 2364086
Number of successful extensions: 7181
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7180
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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