Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23m20
(527 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase pro... 24 1.1
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 2.6
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 2.6
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 3.4
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 22 3.4
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 4.5
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 5.9
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 5.9
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 5.9
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 5.9
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 5.9
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 5.9
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 7.8
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 7.8
>AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase
protein.
Length = 85
Score = 23.8 bits (49), Expect = 1.1
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 156 NNTID*KNYSNIFFLFIETQL-NIFGASLLYFRY 254
NN N SN+F+LF+ T ++ GA+ Y ++
Sbjct: 26 NNMCTSLNLSNLFWLFVGTYFPSLIGANEHYSKF 59
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.6 bits (46), Expect = 2.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 234 SLLYFRYILDVFFLINGNILKKKL*YDINVISLI 335
S L YI ++ N N KKL Y+IN I I
Sbjct: 83 SSLSNNYISNISNYNNNNNYNKKLYYNINYIEQI 116
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.6 bits (46), Expect = 2.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 234 SLLYFRYILDVFFLINGNILKKKL*YDINVISLI 335
S L YI ++ N N KKL Y+IN I I
Sbjct: 321 SSLSNNYISNISNYNNNNNYNKKLYYNINYIEQI 354
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 3.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 234 SLLYFRYILDVFFLINGNILKKKL*YDINVISLI 335
S L YI ++ N N KKL Y+IN I I
Sbjct: 83 SSLSNNYISNISNYNNDNNYNKKLYYNINYIEQI 116
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 22.2 bits (45), Expect = 3.4
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 298 FFKMLPFIRKNTSNMYRKYNNE 233
F + I++ +SN+Y + NNE
Sbjct: 350 FISGIKIIKQISSNIYERQNNE 371
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 4.5
Identities = 10/45 (22%), Positives = 20/45 (44%)
Frame = -1
Query: 461 ISKQRGRTRTWNVTYVSNTGLFIYRLSKIYLHKNYYTSHCSSDKR 327
++ + R W V + + Y + + + YT CS++KR
Sbjct: 415 LTVENNRRNPWFVEFWEHHFQCRYPNASVTPYNKNYTKFCSTEKR 459
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 5.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -2
Query: 334 ISDITLISYYSFFFKMLPF 278
+ D+ L +YY + +MLP+
Sbjct: 225 MEDVELNAYYYYMREMLPY 243
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 5.9
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -2
Query: 334 ISDITLISYYSFFFKMLPF 278
+ D+ L +YY + +MLP+
Sbjct: 225 MEDVELNAYYYYMREMLPY 243
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.4 bits (43), Expect = 5.9
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = -2
Query: 457 ANNGGGREHGM*HTYLTPGYLFIGFQKFIYTKIITLHIV 341
A GG R + HTY P F + I IT+ +
Sbjct: 600 AGGGGARSYVDPHTYEDPNQAVREFAREIDAGYITIEAI 638
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 207 ETQLNIFGASLLYFRYILDVFFLI 278
ET N+F S+ +F +LD + L+
Sbjct: 538 ETYCNLFSLSVDHFNAVLDQYPLM 561
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 207 ETQLNIFGASLLYFRYILDVFFLI 278
ET N+F S+ +F +LD + L+
Sbjct: 506 ETYCNLFSLSVDHFNAVLDQYPLM 529
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 410 NTGLFIYRLSKIYLHK 363
N LFIY LS LH+
Sbjct: 121 NPNLFIYALSVAILHR 136
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.0 bits (42), Expect = 7.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 334 ISDITLISYYSFFFKMLPF 278
I DI L +YY F + PF
Sbjct: 224 IEDIGLNTYYFFLRQAFPF 242
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.0 bits (42), Expect = 7.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 334 ISDITLISYYSFFFKMLPF 278
I DI L +YY F + PF
Sbjct: 224 IEDIGLNTYYFFLRQAFPF 242
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,464
Number of Sequences: 438
Number of extensions: 3000
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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