Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23l22
         (615 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL832323-1|CAD38618.1|  899|Homo sapiens hypothetical protein pr...    30   5.6  
AB051531-1|BAB21835.1|  855|Homo sapiens KIAA1744 protein protein.     30   5.6  
U42391-1|AAC50402.1| 2022|Homo sapiens myosin-IXb protein.             29   9.9  
AB209997-1|BAE06079.1| 2028|Homo sapiens MYO9B variant protein p...    29   9.9  

>AL832323-1|CAD38618.1|  899|Homo sapiens hypothetical protein
           protein.
          Length = 899

 Score = 30.3 bits (65), Expect = 5.6
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -1

Query: 564 HRLRRKPLLLEAKISARGVRYKSATAYCDQTVLVKWSLIS 445
           HR +R+ + +E KI  +GV+ K A  Y + T  V WS +S
Sbjct: 66  HRAQREAVHIE-KIMLKGVQRKRADKYWEYTFKVNWSDLS 104


>AB051531-1|BAB21835.1|  855|Homo sapiens KIAA1744 protein protein.
          Length = 855

 Score = 30.3 bits (65), Expect = 5.6
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -1

Query: 564 HRLRRKPLLLEAKISARGVRYKSATAYCDQTVLVKWSLIS 445
           HR +R+ + +E KI  +GV+ K A  Y + T  V WS +S
Sbjct: 22  HRAQREAVHIE-KIMLKGVQRKRADKYWEYTFKVNWSDLS 60


>U42391-1|AAC50402.1| 2022|Homo sapiens myosin-IXb protein.
          Length = 2022

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = +3

Query: 471  PSDRNTLSHSCTERHA---HLFLPPAATVSVEGGDACASEYPGTASSKSAG 614
            PSDR+ L HS  E+ A      LPP  TV+ E  +   S      S +  G
Sbjct: 1105 PSDRSPLEHSSPEKEAPSPEKTLPPQKTVAAESHEKVPSSREKRESRRQRG 1155


>AB209997-1|BAE06079.1| 2028|Homo sapiens MYO9B variant protein
            protein.
          Length = 2028

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = +3

Query: 471  PSDRNTLSHSCTERHA---HLFLPPAATVSVEGGDACASEYPGTASSKSAG 614
            PSDR+ L HS  E+ A      LPP  TV+ E  +   S      S +  G
Sbjct: 1111 PSDRSPLEHSSPEKEAPSPEKTLPPQKTVAAESHEKVPSSREKRESRRQRG 1161


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,315,530
Number of Sequences: 237096
Number of extensions: 1636837
Number of successful extensions: 4692
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4692
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)