Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23l04
         (317 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041372-1|AAH41372.2|  296|Homo sapiens LOC283514 protein protein.    31   0.74 
U61520-1|AAB58468.1| 1259|Homo sapiens GT334 protein protein.          29   4.0  
U61500-1|AAC51826.1| 1259|Homo sapiens GT334 protein protein.          29   4.0  
U19252-1|AAC50134.1| 1190|Homo sapiens protein ( Human putative ...    29   4.0  
BC101728-1|AAI01729.1| 1259|Homo sapiens transmembrane protein 1...    29   4.0  
AB001523-1|BAA21099.1| 1259|Homo sapiens TMEM1 protein.                29   4.0  
BC066987-1|AAH66987.1|  242|Homo sapiens DPY19L2P1 protein protein.    28   6.9  
D90188-1|BAA14209.1|  358|Homo sapiens scavenger receptor type I...    27   9.1  
D90187-1|BAA14208.1|  451|Homo sapiens scavenger receptor type I...    27   9.1  
DQ144993-1|AAZ38715.1|  451|Homo sapiens macrophage scavenger re...    27   9.1  
BC063878-1|AAH63878.1|  451|Homo sapiens MSR1 protein protein.         27   9.1  
AF037351-1|AAC09251.1|  388|Homo sapiens macrophage scavenger re...    27   9.1  

>BC041372-1|AAH41372.2|  296|Homo sapiens LOC283514 protein protein.
          Length = 296

 Score = 31.1 bits (67), Expect = 0.74
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = -3

Query: 306 HIHCFITK---L*HHGILQPSHQHHQTKDLHSSPLSAVFIFCMQLPC 175
           H HC       L HH    P H HHQ   LH++P++     C    C
Sbjct: 97  HHHCHHRHHHHLRHHA--HPHHLHHQEAGLHANPVTPCLCMCPLFSC 141


>U61520-1|AAB58468.1| 1259|Homo sapiens GT334 protein protein.
          Length = 1259

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = -3

Query: 273 HGILQPSHQHHQTKDLHSSPLSAVF----IFCMQLPCYN 169
           H I+ P H   Q +DLH  P +AV     + C+++  Y+
Sbjct: 576 HKIVLPMHSFAQLRDLHFDPSNAVVHVGGVLCVEITMYS 614


>U61500-1|AAC51826.1| 1259|Homo sapiens GT334 protein protein.
          Length = 1259

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = -3

Query: 273 HGILQPSHQHHQTKDLHSSPLSAVF----IFCMQLPCYN 169
           H I+ P H   Q +DLH  P +AV     + C+++  Y+
Sbjct: 576 HKIVLPMHSFAQLRDLHFDPSNAVVHVGGVLCVEITMYS 614


>U19252-1|AAC50134.1| 1190|Homo sapiens protein ( Human putative
           transmembrane protein mRNA, complete cds. ).
          Length = 1190

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = -3

Query: 273 HGILQPSHQHHQTKDLHSSPLSAVF----IFCMQLPCYN 169
           H I+ P H   Q +DLH  P +AV     + C+++  Y+
Sbjct: 576 HKIVLPMHSFAQLRDLHFDPSNAVVHVGGVLCVEITMYS 614


>BC101728-1|AAI01729.1| 1259|Homo sapiens transmembrane protein 1
           protein.
          Length = 1259

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = -3

Query: 273 HGILQPSHQHHQTKDLHSSPLSAVF----IFCMQLPCYN 169
           H I+ P H   Q +DLH  P +AV     + C+++  Y+
Sbjct: 576 HKIVLPMHSFAQLRDLHFDPSNAVVHVGGVLCVEITMYS 614


>AB001523-1|BAA21099.1| 1259|Homo sapiens TMEM1 protein.
          Length = 1259

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = -3

Query: 273 HGILQPSHQHHQTKDLHSSPLSAVF----IFCMQLPCYN 169
           H I+ P H   Q +DLH  P +AV     + C+++  Y+
Sbjct: 576 HKIVLPMHSFAQLRDLHFDPSNAVVHVGGVLCVEITMYS 614


>BC066987-1|AAH66987.1|  242|Homo sapiens DPY19L2P1 protein protein.
          Length = 242

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -2

Query: 241 SNKRLAFFSIISSLHFLHAATLLQPLVEYSASQELHWSMKF 119
           S   L+    ++ LH+LH  TL +    +S    L W M F
Sbjct: 101 SRTTLSIAIFVAILHWLHLVTLFENDRHFSHLSSLEWEMTF 141


>D90188-1|BAA14209.1|  358|Homo sapiens scavenger receptor type II
           protein.
          Length = 358

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -2

Query: 262 PAQSSASSNKRLAFFSIISSLHFLHAATLLQPLVEYSASQELHWSMKFTKVTSAIPEQII 83
           P  S +   K  +F + + +L+ L  A L+ PL+   A+Q L W  K   V+S     I 
Sbjct: 36  PKNSPSLQEKLKSFKAALIALYLLVFAVLI-PLIGIVAAQLLKWETKNCSVSSTNANDIT 94

Query: 82  LS 77
            S
Sbjct: 95  QS 96


>D90187-1|BAA14208.1|  451|Homo sapiens scavenger receptor type I
           protein.
          Length = 451

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -2

Query: 262 PAQSSASSNKRLAFFSIISSLHFLHAATLLQPLVEYSASQELHWSMKFTKVTSAIPEQII 83
           P  S +   K  +F + + +L+ L  A L+ PL+   A+Q L W  K   V+S     I 
Sbjct: 36  PKNSPSLQEKLKSFKAALIALYLLVFAVLI-PLIGIVAAQLLKWETKNCSVSSTNANDIT 94

Query: 82  LS 77
            S
Sbjct: 95  QS 96


>DQ144993-1|AAZ38715.1|  451|Homo sapiens macrophage scavenger
           receptor 1 protein.
          Length = 451

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -2

Query: 262 PAQSSASSNKRLAFFSIISSLHFLHAATLLQPLVEYSASQELHWSMKFTKVTSAIPEQII 83
           P  S +   K  +F + + +L+ L  A L+ PL+   A+Q L W  K   V+S     I 
Sbjct: 36  PKNSPSLQEKLKSFKAALIALYLLVFAVLI-PLIGIVAAQLLKWETKNCSVSSTNANDIT 94

Query: 82  LS 77
            S
Sbjct: 95  QS 96


>BC063878-1|AAH63878.1|  451|Homo sapiens MSR1 protein protein.
          Length = 451

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -2

Query: 262 PAQSSASSNKRLAFFSIISSLHFLHAATLLQPLVEYSASQELHWSMKFTKVTSAIPEQII 83
           P  S +   K  +F + + +L+ L  A L+ PL+   A+Q L W  K   V+S     I 
Sbjct: 36  PKNSPSLQEKLKSFKAALIALYLLVFAVLI-PLIGIVAAQLLKWETKNCSVSSTNANDIT 94

Query: 82  LS 77
            S
Sbjct: 95  QS 96


>AF037351-1|AAC09251.1|  388|Homo sapiens macrophage scavenger
           receptor type III protein.
          Length = 388

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -2

Query: 262 PAQSSASSNKRLAFFSIISSLHFLHAATLLQPLVEYSASQELHWSMKFTKVTSAIPEQII 83
           P  S +   K  +F + + +L+ L  A L+ PL+   A+Q L W  K   V+S     I 
Sbjct: 36  PKNSPSLQEKLKSFKAALIALYLLVFAVLI-PLIGIVAAQLLKWETKNCSVSSTNANDIT 94

Query: 82  LS 77
            S
Sbjct: 95  QS 96


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,804,817
Number of Sequences: 237096
Number of extensions: 850069
Number of successful extensions: 1188
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)