Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23l04
         (317 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2617|AAF53476.2| 1120|Drosophila melanogaster CG4587-PA...    28   2.3  
M32660-1|AAA28895.1|  490|Drosophila melanogaster protein ( D.me...    27   3.9  
BT024203-1|ABC86265.1|  490|Drosophila melanogaster RE45089p pro...    27   3.9  
AE014296-3172|AAF49144.2|  490|Drosophila melanogaster CG9262-PA...    27   3.9  
BT022200-1|AAY51594.1|  751|Drosophila melanogaster IP01101p pro...    26   9.1  

>AE014134-2617|AAF53476.2| 1120|Drosophila melanogaster CG4587-PA
           protein.
          Length = 1120

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -2

Query: 190 HAATLLQPLVEYSASQELHWSMKFTKVTSAI 98
           +A  + +P++ Y A   +HWS  F  V++ +
Sbjct: 333 YALVMARPMIMYQADHPVHWSPVFVAVSTPV 363


>M32660-1|AAA28895.1|  490|Drosophila melanogaster protein (
           D.melanogaster Sha12protein mRNA, complete cds. ).
          Length = 490

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 310 FPYSLFYYKTLASRYPPAQSSASSNKRLAFFSII 209
           F + L YY+T    YP  +   S ++ LAFF I+
Sbjct: 92  FRHILNYYRTGKLHYPKHECLTSYDEELAFFGIM 125


>BT024203-1|ABC86265.1|  490|Drosophila melanogaster RE45089p
           protein.
          Length = 490

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 310 FPYSLFYYKTLASRYPPAQSSASSNKRLAFFSII 209
           F + L YY+T    YP  +   S ++ LAFF I+
Sbjct: 92  FRHILNYYRTGKLHYPKHECLTSYDEELAFFGIM 125


>AE014296-3172|AAF49144.2|  490|Drosophila melanogaster CG9262-PA
           protein.
          Length = 490

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 310 FPYSLFYYKTLASRYPPAQSSASSNKRLAFFSII 209
           F + L YY+T    YP  +   S ++ LAFF I+
Sbjct: 92  FRHILNYYRTGKLHYPKHECLTSYDEELAFFGIM 125


>BT022200-1|AAY51594.1|  751|Drosophila melanogaster IP01101p
           protein.
          Length = 751

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = -3

Query: 300 HCFITKL*HHGILQPSHQHHQTKDLHSSPLSA 205
           H F   L HH   Q  HQHH     HS  L +
Sbjct: 98  HQFHHHLHHHHSHQHHHQHHHLHQHHSHSLQS 129


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,781,111
Number of Sequences: 53049
Number of extensions: 264785
Number of successful extensions: 689
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)