Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23l04
(317 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66513-8|CAA91340.2| 563|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z75550-2|CAA99928.2| 421|Caenorhabditis elegans Hypothetical pr... 26 5.1
AF106573-3|AAF02106.1| 198|Caenorhabditis elegans Hypothetical ... 26 5.1
Z92825-7|CAB07317.1| 487|Caenorhabditis elegans Hypothetical pr... 26 6.8
Z81041-15|CAB02792.1| 487|Caenorhabditis elegans Hypothetical p... 26 6.8
Z66513-9|CAH19083.1| 561|Caenorhabditis elegans Hypothetical pr... 26 6.8
U23514-8|AAC46540.2| 467|Caenorhabditis elegans Hypothetical pr... 26 6.8
AL132846-8|CAJ76974.2| 180|Caenorhabditis elegans Hypothetical ... 26 6.8
AL132846-7|CAB60345.2| 293|Caenorhabditis elegans Hypothetical ... 26 6.8
AL132846-6|CAJ76973.1| 180|Caenorhabditis elegans Hypothetical ... 26 6.8
AL132846-5|CAJ76972.1| 377|Caenorhabditis elegans Hypothetical ... 26 6.8
AC006714-7|AAK29718.3| 612|Caenorhabditis elegans Hypothetical ... 26 6.8
AC025716-18|AAT81178.1| 998|Caenorhabditis elegans Hypothetical... 25 8.9
>Z66513-8|CAA91340.2| 563|Caenorhabditis elegans Hypothetical
protein F54D5.15a protein.
Length = 563
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = -2
Query: 280 LASRYPPAQSSASSNKRLAFFSIISSLHFLHAATLLQPLVE-YSASQELHWSMKFTKVTS 104
+++++PPAQSSA + R+ S S+ + T+ + E YS+ +++ + T
Sbjct: 9 ISNKFPPAQSSAPNPSRMFCVSYASTQQSANTPTIHEQQEEIYSSLKKVRTTDDLTSSQL 68
Query: 103 AIPEQIIL 80
+I + + +
Sbjct: 69 SIDKHVTM 76
>Z75550-2|CAA99928.2| 421|Caenorhabditis elegans Hypothetical
protein T22C1.3 protein.
Length = 421
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 221 LLHYQQSSFF-ACSYPVTTISRIFCLSGTALVHEVYQSDFSYS 96
+LH+ F + +P T++++ L VH+VY+ F Y+
Sbjct: 301 ILHFTIIGFLVSIFFPYPTLNQVSLLLAFLPVHDVYKKHFRYT 343
>AF106573-3|AAF02106.1| 198|Caenorhabditis elegans Hypothetical
protein F52D2.10 protein.
Length = 198
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 107 FSYS*TNNLILSISCTQYKHLFNIF 33
F YS NNL I C +H FN F
Sbjct: 170 FEYSDNNNLF-EIKCMSRQHFFNFF 193
>Z92825-7|CAB07317.1| 487|Caenorhabditis elegans Hypothetical
protein C27A7.6 protein.
Length = 487
Score = 25.8 bits (54), Expect = 6.8
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -2
Query: 310 FPYSL-FYYKTLASRYPPAQSSASSNKRLAFFSIISSLHFLHAATLLQPLVEYSASQELH 134
FP+ L + +T PP+ SSA+ + FF S L + A + ++ + L
Sbjct: 225 FPFVLALFVRTKLPPTPPSASSAAHQNNIGFFK--SILQCIFNAQFFIQMTLFAFAFSLL 282
Query: 133 WSM 125
WS+
Sbjct: 283 WSL 285
>Z81041-15|CAB02792.1| 487|Caenorhabditis elegans Hypothetical
protein C27A7.6 protein.
Length = 487
Score = 25.8 bits (54), Expect = 6.8
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -2
Query: 310 FPYSL-FYYKTLASRYPPAQSSASSNKRLAFFSIISSLHFLHAATLLQPLVEYSASQELH 134
FP+ L + +T PP+ SSA+ + FF S L + A + ++ + L
Sbjct: 225 FPFVLALFVRTKLPPTPPSASSAAHQNNIGFFK--SILQCIFNAQFFIQMTLFAFAFSLL 282
Query: 133 WSM 125
WS+
Sbjct: 283 WSL 285
>Z66513-9|CAH19083.1| 561|Caenorhabditis elegans Hypothetical
protein F54D5.15c protein.
Length = 561
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -2
Query: 271 RYPPAQSSASSNKRLAFFSIISSLHFLHAATLLQPLVE-YSASQELHWSMKFTKVTSAIP 95
++PPAQSSA + R+ S S+ + T+ + E YS+ +++ + T +I
Sbjct: 10 KFPPAQSSAPNPSRMFCVSYASTQQSANTPTIHEQQEEIYSSLKKVRTTDDLTSSQLSID 69
Query: 94 EQIIL 80
+ + +
Sbjct: 70 KHVTM 74
>U23514-8|AAC46540.2| 467|Caenorhabditis elegans Hypothetical
protein F48E8.2 protein.
Length = 467
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 150 AEYSTNGCNRVAACKK*RLLIMEKNASLLFDDADD 254
AE TN R A RL +EKN LL+DD +D
Sbjct: 305 AEEETNPIKRAAMD---RLKEIEKNDELLYDDQED 336
>AL132846-8|CAJ76974.2| 180|Caenorhabditis elegans Hypothetical
protein Y43D4A.4b protein.
Length = 180
Score = 25.8 bits (54), Expect = 6.8
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -2
Query: 310 FPYSL-FYYKTLASRYPPAQSSASSNKRLAFFSIISSLHFLHAATLLQPLVEYSASQELH 134
FP+ L + +T PP+ SSA+ + FF S L + A + ++ + L
Sbjct: 15 FPFVLALFVRTKLPPTPPSASSAAHQNNIGFFK--SILQCIFNAQFFIQMTLFAFAFSLL 72
Query: 133 WSM 125
WS+
Sbjct: 73 WSL 75
>AL132846-7|CAB60345.2| 293|Caenorhabditis elegans Hypothetical
protein Y43D4A.4a protein.
Length = 293
Score = 25.8 bits (54), Expect = 6.8
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -2
Query: 310 FPYSL-FYYKTLASRYPPAQSSASSNKRLAFFSIISSLHFLHAATLLQPLVEYSASQELH 134
FP+ L + +T PP+ SSA+ + FF S L + A + ++ + L
Sbjct: 128 FPFVLALFVRTKLPPTPPSASSAAHQNNIGFFK--SILQCIFNAQFFIQMTLFAFAFSLL 185
Query: 133 WSM 125
WS+
Sbjct: 186 WSL 188
>AL132846-6|CAJ76973.1| 180|Caenorhabditis elegans Hypothetical
protein Y43D4A.3b protein.
Length = 180
Score = 25.8 bits (54), Expect = 6.8
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -2
Query: 310 FPYSL-FYYKTLASRYPPAQSSASSNKRLAFFSIISSLHFLHAATLLQPLVEYSASQELH 134
FP+ L + +T PP+ SSA+ + FF S L + A + ++ + L
Sbjct: 15 FPFVLALFVRTKLPPTPPSASSAAHQNNIGFFK--SILQCIFNAQFFIQMTLFAFAFSLL 72
Query: 133 WSM 125
WS+
Sbjct: 73 WSL 75
>AL132846-5|CAJ76972.1| 377|Caenorhabditis elegans Hypothetical
protein Y43D4A.3a protein.
Length = 377
Score = 25.8 bits (54), Expect = 6.8
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -2
Query: 310 FPYSL-FYYKTLASRYPPAQSSASSNKRLAFFSIISSLHFLHAATLLQPLVEYSASQELH 134
FP+ L + +T PP+ SSA+ + FF S L + A + ++ + L
Sbjct: 212 FPFVLALFVRTKLPPTPPSASSAAHQNNIGFFK--SILQCIFNAQFFIQMTLFAFAFSLL 269
Query: 133 WSM 125
WS+
Sbjct: 270 WSL 272
>AC006714-7|AAK29718.3| 612|Caenorhabditis elegans Hypothetical
protein Y119D3B.11 protein.
Length = 612
Score = 25.8 bits (54), Expect = 6.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 218 LHYQQSSFFACSYPVTTISRIFCLS 144
+ Y ++ FFAC Y ++ +SR L+
Sbjct: 282 MKYLKNRFFACDYSISALSRAIQLA 306
>AC025716-18|AAT81178.1| 998|Caenorhabditis elegans Hypothetical
protein Y39G10AR.3 protein.
Length = 998
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 316 FFFPYSLFYYKTLASRYPPAQSSASSNKRLAF 221
FF P +F+ + Y P Q SNK++ +
Sbjct: 610 FFAPTKVFFLNEATALYGPFQIPMPSNKKIVY 641
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,318,047
Number of Sequences: 27780
Number of extensions: 139794
Number of successful extensions: 336
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 336
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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