Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23k18
(702 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 396 e-110
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 396 e-110
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 396 e-110
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 396 e-110
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 396 e-110
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 396 e-110
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 396 e-110
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 396 e-110
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 396 e-110
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 395 e-110
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 395 e-110
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 395 e-110
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 394 e-109
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 394 e-109
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 253 5e-67
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 225 9e-59
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 208 1e-53
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 171 2e-42
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 167 4e-41
AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens ... 35 0.24
EF011612-1|ABK41102.1| 514|Homo sapiens CDW2/WDR26 protein. 30 9.2
BC063817-1|AAH63817.1| 404|Homo sapiens WDR26 protein protein. 30 9.2
BC052301-1|AAH52301.2| 514|Homo sapiens WD repeat domain 26 pro... 30 9.2
BC031471-1|AAH31471.2| 373|Homo sapiens WDR26 protein protein. 30 9.2
AY304473-1|AAQ74770.1| 514|Homo sapiens WD40 repeat protein 26 ... 30 9.2
AY221751-1|AAO67709.1| 498|Homo sapiens myocardial ischemic pre... 30 9.2
AK024669-1|BAB14955.1| 367|Homo sapiens protein ( Homo sapiens ... 30 9.2
AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26 var... 30 9.2
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 396 bits (975), Expect = e-110
Identities = 193/223 (86%), Positives = 204/223 (91%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 697
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 396 bits (975), Expect = e-110
Identities = 193/223 (86%), Positives = 204/223 (91%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 697
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 396 bits (975), Expect = e-110
Identities = 193/223 (86%), Positives = 204/223 (91%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 697
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 396 bits (975), Expect = e-110
Identities = 193/223 (86%), Positives = 204/223 (91%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 697
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 396 bits (975), Expect = e-110
Identities = 193/223 (86%), Positives = 204/223 (91%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 697
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 396 bits (975), Expect = e-110
Identities = 193/223 (86%), Positives = 204/223 (91%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 697
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 396 bits (975), Expect = e-110
Identities = 193/223 (86%), Positives = 204/223 (91%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 697
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 396 bits (975), Expect = e-110
Identities = 193/223 (86%), Positives = 204/223 (91%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 697
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 396 bits (975), Expect = e-110
Identities = 193/223 (86%), Positives = 204/223 (91%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 697
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 395 bits (973), Expect = e-110
Identities = 190/218 (87%), Positives = 201/218 (92%)
Frame = +2
Query: 44 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 223
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 224 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 403
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 404 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 583
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 584 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 697
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 221
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 395 bits (973), Expect = e-110
Identities = 190/218 (87%), Positives = 201/218 (92%)
Frame = +2
Query: 44 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 223
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 224 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 403
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 404 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 583
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 584 KVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 697
KVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 221
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 395 bits (972), Expect = e-110
Identities = 192/223 (86%), Positives = 204/223 (91%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 697
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 394 bits (971), Expect = e-109
Identities = 192/223 (86%), Positives = 204/223 (91%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 697
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 394 bits (970), Expect = e-109
Identities = 192/223 (86%), Positives = 203/223 (91%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 388
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRAC 119
Query: 389 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 568
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 569 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 697
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 222
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 253 bits (619), Expect = 5e-67
Identities = 119/137 (86%), Positives = 125/137 (91%)
Frame = +2
Query: 287 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 466
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 467 RAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQP 646
RAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP P
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 120
Query: 647 DHILVTEPKDEPVPLEP 697
DH+ + EPKDE +P P
Sbjct: 121 DHVSIVEPKDEILPTTP 137
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 225 bits (551), Expect = 9e-59
Identities = 110/127 (86%), Positives = 116/127 (91%)
Frame = +2
Query: 215 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 394
+GRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 395 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 574
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
Query: 575 LGIKVKI 595
V +
Sbjct: 126 WDTSVHL 132
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 208 bits (509), Expect = 1e-53
Identities = 105/118 (88%), Positives = 111/118 (94%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 382
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 171 bits (417), Expect = 2e-42
Identities = 79/96 (82%), Positives = 84/96 (87%)
Frame = +2
Query: 410 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 589
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 590 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 697
KIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTP 96
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 167 bits (405), Expect = 4e-41
Identities = 84/96 (87%), Positives = 89/96 (92%)
Frame = +2
Query: 29 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 208
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 209 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRG 316
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRG
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ45717 fis, clone FELNG2001613. ).
Length = 237
Score = 35.1 bits (77), Expect = 0.24
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +1
Query: 553 CASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPR 693
CAS RS R Q Q P P A RP PG+ APR
Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGSLGPSAPAAPR 160
>EF011612-1|ABK41102.1| 514|Homo sapiens CDW2/WDR26 protein.
Length = 514
Score = 29.9 bits (64), Expect = 9.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 274 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 146
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>BC063817-1|AAH63817.1| 404|Homo sapiens WDR26 protein protein.
Length = 404
Score = 29.9 bits (64), Expect = 9.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 274 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 146
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 295 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 336
>BC052301-1|AAH52301.2| 514|Homo sapiens WD repeat domain 26
protein.
Length = 514
Score = 29.9 bits (64), Expect = 9.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 274 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 146
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>BC031471-1|AAH31471.2| 373|Homo sapiens WDR26 protein protein.
Length = 373
Score = 29.9 bits (64), Expect = 9.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 274 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 146
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 264 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 305
>AY304473-1|AAQ74770.1| 514|Homo sapiens WD40 repeat protein 26
protein.
Length = 514
Score = 29.9 bits (64), Expect = 9.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 274 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 146
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>AY221751-1|AAO67709.1| 498|Homo sapiens myocardial ischemic
preconditioning upregulated protein 2 protein.
Length = 498
Score = 29.9 bits (64), Expect = 9.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 274 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 146
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 389 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 430
>AK024669-1|BAB14955.1| 367|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21016 fis, clone CAE05735. ).
Length = 367
Score = 29.9 bits (64), Expect = 9.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 274 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 146
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 258 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 299
>AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26
variant protein.
Length = 725
Score = 29.9 bits (64), Expect = 9.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 274 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 146
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 616 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 657
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,016,860
Number of Sequences: 237096
Number of extensions: 2685502
Number of successful extensions: 10975
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 10386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10974
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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