Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23k01
(486 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0882 + 28467691-28467730,28468386-28468675,28469262-284694... 35 0.040
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 32 0.21
06_03_1058 + 27254195-27254382,27255041-27255116,27255254-272554... 31 0.65
05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818... 30 1.1
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 29 1.5
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 29 2.0
08_01_0603 + 5308333-5308659,5309688-5309813,5309896-5311470 29 2.0
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 29 2.0
11_06_0007 - 19171122-19172036 29 2.6
08_02_0183 + 13936759-13936807,13936885-13936971,13937069-139372... 29 2.6
05_04_0300 - 19969066-19969535,19971216-19972686 29 2.6
02_04_0435 + 22912993-22913456,22913847-22914012,22914096-229141... 28 3.5
11_06_0409 - 23217558-23218355,23218808-23219297,23219515-232195... 28 4.6
07_03_0846 - 21983581-21986055 28 4.6
01_06_1713 - 39359558-39359590,39360000-39360074,39360437-393606... 28 4.6
12_02_0793 - 23200915-23202931,23203136-23203959 27 6.0
09_04_0468 + 17848144-17848174,17849032-17849378,17849505-17849921 27 6.0
03_05_0728 - 27174157-27174408,27175316-27175364,27175454-271755... 27 6.0
07_01_1193 - 11318111-11318318,11318790-11318884,11320097-113201... 27 8.0
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329... 27 8.0
>03_05_0882 +
28467691-28467730,28468386-28468675,28469262-28469411,
28470126-28470214,28470331-28470440,28470545-28470639,
28471110-28471162,28471374-28471539,28471909-28472001,
28472304-28472432,28472549-28472668,28472862-28472942,
28473495-28473602,28473895-28474038,28474120-28474218,
28474300-28474379,28474830-28474922,28475197-28475320
Length = 687
Score = 34.7 bits (76), Expect = 0.040
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +2
Query: 161 AKNSQVEHKMTMLNCDYAMLKHEHKITELKLKWANRD--LEEFTKKTQELQSTVNDLQEQ 334
A N + K+ L D K EH++T+LK+K + + LEE KK EL + + Q+
Sbjct: 377 ATNGEEMSKLEALLLDKNR-KMEHELTQLKVKISEKSNLLEEAEKKIAELTAKAEEQQKL 435
Query: 335 LRKQVAESQAKFSQFERRNSEL 400
+ K + +S +RR S L
Sbjct: 436 ILKLEDDILKGYSSTDRRTSLL 457
>02_05_0232 +
27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 32.3 bits (70), Expect = 0.21
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 179 EHKMTMLNCDYAMLKHEHKITELK--LKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVA 352
EHK + + + L EH+ITE++ LK L E Q LQ+ LQ++ V+
Sbjct: 506 EHKDKLHDVEEQKLMVEHRITEIRSVLKEREEKLAESKYLLQVLQADKEKLQQERDAAVS 565
Query: 353 ESQ 361
ESQ
Sbjct: 566 ESQ 568
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +2
Query: 164 KNSQVEHKMTMLNCDYAMLKHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQ--- 334
K S K+ L Y KITE L+ ++ EE + L ++D++EQ
Sbjct: 405 KASHFASKVKELENLYQKEVMHRKITEEALEKQIQETEETERHCNALYDKLHDVEEQKLM 464
Query: 335 LRKQVAESQAKFSQFERRNSELVAELYTIE 424
+ + + E +A + E R ++ + +T+E
Sbjct: 465 VEQHITEMEAVLKEREDRLHDVEEQKFTVE 494
>06_03_1058 +
27254195-27254382,27255041-27255116,27255254-27255418,
27255580-27255671,27255713-27255754,27256342-27256387,
27258456-27258683
Length = 278
Score = 30.7 bits (66), Expect = 0.65
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 218 LKHEHKIT--ELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFS 373
L H ++IT +L+ NRD E+ + L++ ++ L+ LR+Q E + S
Sbjct: 67 LFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVS 120
>05_06_0219 + 26479708-26479710,26481045-26481173,26481675-26481818,
26481936-26482081,26482185-26482341,26482489-26482547,
26482787-26482946,26483020-26483169,26483279-26483415,
26483518-26483664,26483733-26483834,26483917-26483974,
26484084-26484185,26484322-26484379,26484717-26484775,
26486488-26486525,26486688-26486814,26486900-26487067,
26487879-26488010,26488089-26488198,26488273-26488333,
26488761-26488938,26489041-26489246,26489431-26489550,
26489631-26489729,26489968-26490156,26490291-26490430,
26491149-26491316,26491438-26491605,26491764-26491931,
26492250-26492417,26492533-26492700,26492853-26493020,
26493118-26493285,26493471-26493638,26493756-26493920,
26494679-26494850,26495012-26495175,26495296-26495405,
26495481-26495596,26495686-26495766,26495849-26496034,
26496203-26496547,26496637-26496777,26496869-26496916,
26497162-26497242,26497350-26497406,26497495-26497575,
26497675-26497757,26497842-26497968
Length = 2159
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +2
Query: 290 KTQELQSTVNDLQEQ---LRKQVAESQAKFSQFERRNSELVA 406
+ Q+LQ TV L+++ +RK +AES + RRN +L++
Sbjct: 1609 RAQQLQDTVQKLRQESDAVRKALAESHGRNEDLIRRNDDLLS 1650
>12_02_1286 - 27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 221 KHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSE 397
K + + +KLK LE+ K QE +S EQ+ Q+ E +A+ ++ ++ E
Sbjct: 862 KRDMQAPIIKLKETRESLEKELKSLQERESEARAEAEQISNQMEELKAEAEDWKSKSDE 920
>10_08_0043 -
14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 29.1 bits (62), Expect = 2.0
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +2
Query: 164 KNSQVEHKMTMLNCDYAMLKHEHKITELKLKWANRDLEEFTKKTQELQSTV---NDLQEQ 334
K Q E + + Y+ + E L+++ N L E + EL ST+ N ++
Sbjct: 633 KRVQAETSLMSMESMYSQSQEEVNRLHLEIEKLNFKLNELENLSSELNSTILLLNAEKDA 692
Query: 335 LRKQVAESQAKFSQFERRNSELVAELYTIE 424
+ +S + S E S+L A+L IE
Sbjct: 693 TDLKNQQSLVRISDLESELSKLQAQLEKIE 722
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 254 KWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAK 367
+W+N LE+ + Q LQS ++E RK + S K
Sbjct: 1857 QWSNNVLEKLSSDAQRLQSIQVSIKELKRKMGSPSNGK 1894
>08_01_0603 + 5308333-5308659,5309688-5309813,5309896-5311470
Length = 675
Score = 29.1 bits (62), Expect = 2.0
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +2
Query: 173 QVEHKMTMLNCDYAML-KHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLR--K 343
Q++H L + A K EHK + L+ DLE K ++L+ L ++L+ K
Sbjct: 231 QLDHLFKKLTEEKAAWRKREHKKVQAILEDMKADLEHEKKNRRQLEKINIKLVDELKEVK 290
Query: 344 QVAESQAKFSQFERRNSELVAELYT 418
A + + ER+ EL E+ T
Sbjct: 291 MAANNLLQEYDNERKTRELTEEVCT 315
>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +2
Query: 239 TELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVA---E 409
TE+KL+ A +L + + QEL + +EQ A++ A + E EL A E
Sbjct: 988 TEMKLQQAGENLTQKETECQELSEKLKAAEEQAASYQAKATAAAEEVESVKVELEAFETE 1047
Query: 410 LYTIE 424
+ T+E
Sbjct: 1048 ISTLE 1052
>11_06_0007 - 19171122-19172036
Length = 304
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 260 ANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAEL 412
A+R L+E + + DL+E+LR+ AESQA + R N + A L
Sbjct: 140 ASRRLQETESQLAAARRRAADLEERLRQAAAESQA-WCGLARSNEAVAAGL 189
>08_02_0183 +
13936759-13936807,13936885-13936971,13937069-13937202,
13937830-13938024,13939283-13939341,13939409-13939463,
13939577-13939624,13941215-13941248,13941425-13941478,
13942450-13942493,13942771-13942818,13942901-13943020,
13943132-13943212
Length = 335
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +2
Query: 272 LEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSEL 400
+EE+ + L+S ++DL+E+ K+ AE Q + + + ++L
Sbjct: 1 MEEYLANMKTLRSYMSDLEEEATKRSAEEQRQRTAIDAHGADL 43
>05_04_0300 - 19969066-19969535,19971216-19972686
Length = 646
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 212 AMLKHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAES 358
A L + +L + R +EE +K + + S +NDL ++ VAE+
Sbjct: 177 ARLMRNRESAQLSRQRKKRYVEELEEKVKSMHSVINDLNSRISFVVAEN 225
>02_04_0435 +
22912993-22913456,22913847-22914012,22914096-22914146,
22914353-22914578,22915275-22915963,22916055-22916408
Length = 649
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 290 KTQELQSTVNDLQEQLRKQVAESQAKFSQFER 385
K EL++ V++L+EQL+K +E ++FE+
Sbjct: 462 KESELEAEVSNLKEQLKKTSSEKAEMTAKFEK 493
>11_06_0409 -
23217558-23218355,23218808-23219297,23219515-23219591,
23219624-23219863,23220338-23220481,23220522-23220582,
23220875-23220934,23221097-23221192,23221306-23221398,
23221494-23221585
Length = 716
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 251 LKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAEL 412
LK NRDL E QE++ +++ +E L ++ SQ F + +A L
Sbjct: 413 LKEGNRDLSELANLVQEIKRLLSERREVLVTKIHRSQNGLEIFRSIQHKNLANL 466
>07_03_0846 - 21983581-21986055
Length = 824
Score = 27.9 bits (59), Expect = 4.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 345 CLRNCSCRSFTVDCNSC 295
CL NCSC ++T + + C
Sbjct: 383 CLNNCSCNAYTYNSSGC 399
>01_06_1713 -
39359558-39359590,39360000-39360074,39360437-39360662,
39360792-39360880,39360960-39361053,39361134-39361318,
39361415-39361582,39361682-39361822,39362327-39362545,
39362628-39362744,39363154-39363248,39363662-39363743,
39363864-39363926,39364157-39364216,39364312-39364476,
39364574-39364759,39364890-39365180,39365262-39365405,
39365492-39366172,39367045-39367362
Length = 1143
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/63 (22%), Positives = 36/63 (57%)
Frame = +2
Query: 233 KITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAEL 412
K E +L+ + ++L+ + ++ STV++L++ ++ +E + + ER+ L +EL
Sbjct: 740 KKLEQELQESKQELKAKQAQYEKSVSTVSELEKTIKTYGSEREGRLKALERKIKSLKSEL 799
Query: 413 YTI 421
++
Sbjct: 800 QSM 802
>12_02_0793 - 23200915-23202931,23203136-23203959
Length = 946
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 176 VEHKMTMLNCDYAMLKHEHKITELK-LKWANRDLEEFTKKTQELQS 310
VE+KM + D++ LKH H++++LK L+ R + ++ ELQ+
Sbjct: 582 VENKMVL---DHSFLKHIHRLSQLKYLRLNVRRITALPEQLGELQN 624
>09_04_0468 + 17848144-17848174,17849032-17849378,17849505-17849921
Length = 264
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 164 KNSQVEHKMTMLNCDYAMLKHEHKITELKLKWANRDLEEFTKKTQELQSTVND 322
+N + K L DYA L+H + L RD + + +EL++ + D
Sbjct: 84 QNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGD 136
>03_05_0728 - 27174157-27174408,27175316-27175364,27175454-27175536,
27175673-27175753,27175838-27175894,27176103-27176202,
27176280-27176350,27176427-27176567,27176657-27176863,
27177442-27177612,27177735-27177815,27177887-27177940,
27178040-27178154,27178302-27178441,27178976-27179197,
27179278-27179376,27179461-27179580,27179776-27179981,
27180072-27180249,27180426-27180486,27180587-27180696,
27180765-27180896,27181124-27181165,27181592-27181762,
27181806-27181808,27181848-27181974,27182130-27182164,
27182982-27183083,27183167-27183224,27183314-27183415,
27183513-27183659,27183744-27183880,27183973-27184122,
27184234-27184393,27184930-27185075,27185162-27185305,
27185535-27185663,27186376-27186420,27187103-27187192,
27187473-27187475
Length = 1506
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 272 LEEFTKKTQELQSTVNDLQE--QLRKQVAESQAK-FSQFERRNSELV 403
L E T+K L + V L+ Q +Q E+ K +++ ERRN EL+
Sbjct: 955 LVEDTEKINSLTAEVEQLKALLQTERQATETAKKEYAEAERRNEELI 1001
>07_01_1193 -
11318111-11318318,11318790-11318884,11320097-11320150,
11320311-11320648,11323419-11323704
Length = 326
Score = 27.1 bits (57), Expect = 8.0
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +2
Query: 218 LKHEH-KITELKLKWANRDLEEFTKKTQELQSTVNDLQE--QLRKQVAESQAKFSQFERR 388
L H H K+T LK K AN EE K ELQ + +E +LR ++A K + +
Sbjct: 108 LHHYHRKLTILK-KTANTSREEVEKLQIELQGKEDKSKEVKKLRAELASLSEKMKKLKSE 166
Query: 389 NSE 397
+ E
Sbjct: 167 SEE 169
>02_01_0459 +
3298780-3298788,3298900-3299037,3299174-3299207,
3299528-3299531,3299814-3299949,3300034-3300090,
3301689-3301786,3301876-3301947,3302056-3302228,
3302552-3302698,3303113-3303336,3305300-3305306,
3305634-3305800,3306033-3306068,3306787-3307004,
3307115-3307172,3307761-3307842,3308045-3308207,
3308594-3308598,3308700-3308885,3308969-3309548,
3309642-3309774,3309880-3309948,3310184-3310395,
3310654-3310891,3311228-3311386,3311501-3311926,
3312010-3312447,3312593-3312712,3312784-3313266,
3313471-3314009,3314178-3314667,3314836-3314904,
3315735-3315839,3315940-3316158,3316254-3316508,
3316602-3316651,3317175-3317284,3317372-3317454,
3317560-3317772,3317870-3318040
Length = 2391
Score = 27.1 bits (57), Expect = 8.0
Identities = 23/118 (19%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Frame = +2
Query: 35 LIRNRDSIKQHWRELLENNTVNNRIIDLNDVXXXXXXXXXXXAKNSQVEHK-MTMLNCDY 211
L+ R+ ++H ++ + T ++R + L+D + K + + D
Sbjct: 56 LLAGRECERRHEKKTDDGETNSSRSLSLSDNNDEKKKDKFSSGDEKEDHEKQLKQIRLDM 115
Query: 212 AMLKHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFER 385
L+ + T++++ L+E + +++ S VNDL+ QLR++ E S+ ++
Sbjct: 116 EALRDDK--TQMEVI-----LDEKIDEVRKISSKVNDLEVQLRREKDECHRMTSKMKK 166
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,083,082
Number of Sequences: 37544
Number of extensions: 161406
Number of successful extensions: 596
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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