Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23k01
(486 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 31 0.34
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 31 0.34
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 31 0.34
AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical ... 31 0.59
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 30 0.77
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical pr... 30 1.0
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 30 1.0
AL023828-24|CAD56604.1| 196|Caenorhabditis elegans Hypothetical... 29 1.4
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 29 1.4
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 29 1.8
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 29 1.8
U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defecti... 29 2.4
AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome at... 29 2.4
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 28 3.1
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 28 3.1
AC024850-1|AAF60860.2| 404|Caenorhabditis elegans Groundhog (he... 28 3.1
Z93383-6|CAB07623.1| 283|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z81107-1|CAB03225.1| 258|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical pr... 27 5.5
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 27 5.5
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 27 5.5
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 27 5.5
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 27 5.5
AC024875-7|AAK29987.2| 97|Caenorhabditis elegans Knl (kinetoch... 27 5.5
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z73972-4|CAA98260.1| 666|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical p... 27 7.2
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 27 7.2
U29380-17|AAA68733.3| 736|Caenorhabditis elegans Zygote defecti... 27 7.2
U29380-16|AAS60254.1| 761|Caenorhabditis elegans Zygote defecti... 27 7.2
U29380-15|AAS60253.1| 777|Caenorhabditis elegans Zygote defecti... 27 7.2
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 27 7.2
AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical ... 27 7.2
AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical ... 27 7.2
AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein. 27 7.2
AF098501-7|AAC67402.1| 199|Caenorhabditis elegans Hypothetical ... 27 7.2
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 27 7.2
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 27 9.5
U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like p... 27 9.5
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 27 9.5
AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like ... 27 9.5
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 31.5 bits (68), Expect = 0.34
Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = +2
Query: 272 LEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFE---RRNSELVAELYTIEMSK 433
LEE K+ E S++NDL+E+L AES+ K ++++ + +++LV L T++++K
Sbjct: 436 LEEKNKEISERDSSINDLKEKL----AESEKKATKYKNELKEHADLVENL-TLQLNK 487
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.34
Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = +2
Query: 272 LEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFE---RRNSELVAELYTIEMSK 433
LEE K+ E S++NDL+E+L AES+ K ++++ + +++LV L T++++K
Sbjct: 438 LEEKNKEISERDSSINDLKEKL----AESEKKATKYKNELKEHADLVENL-TLQLNK 489
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.34
Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = +2
Query: 272 LEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFE---RRNSELVAELYTIEMSK 433
LEE K+ E S++NDL+E+L AES+ K ++++ + +++LV L T++++K
Sbjct: 438 LEEKNKEISERDSSINDLKEKL----AESEKKATKYKNELKEHADLVENL-TLQLNK 489
>AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical
protein Y43F4B.6 protein.
Length = 1083
Score = 30.7 bits (66), Expect = 0.59
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 248 KLKWANRDLEEFTKKTQ-ELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAEL 412
KL+ R +EE KKT+ EL++ LR+Q AE+ +KF F++++ +A++
Sbjct: 586 KLQETRRRMEETLKKTEDELKNLKTQRLRLLREQRAEA-SKFQAFKQKHEREMAQM 640
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 30.3 bits (65), Expect = 0.77
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +2
Query: 233 KITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFER 385
K T ++K N+ L++ ++ ++ QS V + +LRK +AE+ K +F+R
Sbjct: 541 KKTIQEVKADNKKLQQILEEVRQNQSKVLEENVKLRKGMAEAIEKIEEFKR 591
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 29.9 bits (64), Expect = 1.0
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +2
Query: 203 CDYAMLKHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFE 382
CD + +H+ I ++K K +L E +E++S + E+ KQ+ + Q K +
Sbjct: 950 CDENISRHDKDIEKMKKKC--EELMEKAIDDEEVKSK-KETVERFEKQIKKLQTKGEEMT 1006
Query: 383 RRNSELVA 406
++ SEL A
Sbjct: 1007 KKQSELSA 1014
>Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical
protein F59A2.2 protein.
Length = 520
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/50 (26%), Positives = 30/50 (60%)
Frame = +2
Query: 233 KITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFE 382
K++E K + LEE +K E+++ +ND E+L+++ + + + S ++
Sbjct: 368 KLSEAKAQGVKAVLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYK 417
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 275 EEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAE 409
++ + + L+ TV+DL+ ++KQ +E QAK Q E+ ++
Sbjct: 951 KKIEQDNEGLKKTVSDLETTIKKQESEKQAKDHQIRSLQDEIQSQ 995
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 269 DLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAEL 412
+ E+F + +E Q D+Q QL K +E Q ++FE EL
Sbjct: 1349 ECEQFRESLEEEQDAKTDVQRQLSKANSEIQQWRAKFEGEGVSRAEEL 1396
>AL023828-24|CAD56604.1| 196|Caenorhabditis elegans Hypothetical
protein Y17G7B.21 protein.
Length = 196
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +2
Query: 233 KITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVA 406
K+ + K+A R + +L+ + ++ ++++AES+A+ +F+R EL+A
Sbjct: 72 KLFNVGKKYAKRFATSTSSAASKLRLVKLKIDKKYQQRLAESKARVERFQREREELLA 129
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +2
Query: 161 AKNSQVEHKMTMLNCDYAMLKHEHKITELKLKWANRDLEEFTKKTQELQSTV---NDLQE 331
+++ + EH++ M K E ++ LK + AN +++EF K ++L+ V ++ +E
Sbjct: 397 SESLKYEHELVRKMMIEDMEKLEAEVLALKSQQANLEIQEFHDKIKQLELEVQLSSENKE 456
Query: 332 QLRKQVAESQAKFSQFERRNSELV 403
+L+ ++ Q K S+ + E V
Sbjct: 457 KLQAELMVVQEKASENIKNAEEKV 480
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 242 ELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSEL 400
E KLK + L ++ K +ELQS +N +++L + AE++ + EL
Sbjct: 278 EKKLKTSQEKLVKYEGKIEELQSRLNKKRKELEEVQAENRKLLEDKNTHDFEL 330
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 242 ELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSEL 400
E KLK + L ++ K +ELQS +N +++L + AE++ + EL
Sbjct: 278 EKKLKTSQEKLVKYEGKIEELQSRLNKKRKELEEVQAENRKLLEDKNTHDFEL 330
>U29380-18|ABB88224.1| 733|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform d protein.
Length = 733
Score = 28.7 bits (61), Expect = 2.4
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 18/128 (14%)
Frame = +2
Query: 14 VEFMPLTLIRNRDSIKQ---HWRELLEN-NTVNNRIIDLNDVXXXXXXXXXXXAKNSQVE 181
VE + + LI++++ +K+ EL+E N + N++I V A N +
Sbjct: 439 VEQLEIQLIQHKEKVKELEDRKDELIEERNRLENQLIFKEAVTPRSLHESMFEAGNLSFD 498
Query: 182 HKMTM-LNCDYAMLKHEHKITE---------LKLKWANRDLEE----FTKKTQELQSTVN 319
K T+ L + L + E + LK N LEE TK+ +ELQ +
Sbjct: 499 EKNTLPLEIENKRLTERIQELESLEPLKGELITLKSKNGVLEEEKLFATKQIEELQQQIE 558
Query: 320 DLQEQLRK 343
DLQE L K
Sbjct: 559 DLQENLLK 566
>AY487140-1|AAR32790.1| 733|Caenorhabditis elegans centrosome
attachment protein A protein.
Length = 733
Score = 28.7 bits (61), Expect = 2.4
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 18/128 (14%)
Frame = +2
Query: 14 VEFMPLTLIRNRDSIKQ---HWRELLEN-NTVNNRIIDLNDVXXXXXXXXXXXAKNSQVE 181
VE + + LI++++ +K+ EL+E N + N++I V A N +
Sbjct: 439 VEQLEIQLIQHKEKVKELEDRKDELIEERNRLENQLIFKEAVTPRSLHESMFEAGNLSFD 498
Query: 182 HKMTM-LNCDYAMLKHEHKITE---------LKLKWANRDLEE----FTKKTQELQSTVN 319
K T+ L + L + E + LK N LEE TK+ +ELQ +
Sbjct: 499 EKNTLPLEIENKRLTERIQELESLEPLKGELITLKSKNGVLEEEKLFATKQIEELQQQIE 558
Query: 320 DLQEQLRK 343
DLQE L K
Sbjct: 559 DLQENLLK 566
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +2
Query: 242 ELKLKWANRDLEEFTKKTQELQSTVNDLQEQLR---KQVAESQAKFSQFERRNSELVAEL 412
E KLK A DL+E ++ +E+ + +L ++L K + +S K ++ ++ ++L E
Sbjct: 821 EHKLKNAESDLQEAKRRAEEIGAEKKELSDRLNEMLKNLNQSMQKSAENDKMLTQLREEA 880
Query: 413 YTIE 424
+ E
Sbjct: 881 FAKE 884
Score = 27.9 bits (59), Expect = 4.1
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 269 DLEEFTKKTQELQSTVNDLQEQLRKQ--VAESQAKFSQFERRNSELVAELYTIE 424
+LEE K ELQ V L+E+L K+ VA S + ++E+V + IE
Sbjct: 709 ELEELRNKNLELQEQVKQLKEELEKEKSVAGSGNSGGWSDIDDNEVVEAVQPIE 762
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +2
Query: 242 ELKLKWANRDLEEFTKKTQELQSTVNDLQEQLR---KQVAESQAKFSQFERRNSELVAEL 412
E KLK A DL+E ++ +E+ + +L ++L K + +S K ++ ++ ++L E
Sbjct: 833 EHKLKNAESDLQEAKRRAEEIGAEKKELSDRLNEMLKNLNQSMQKSAENDKMLTQLREEA 892
Query: 413 YTIE 424
+ E
Sbjct: 893 FAKE 896
Score = 27.9 bits (59), Expect = 4.1
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 269 DLEEFTKKTQELQSTVNDLQEQLRKQ--VAESQAKFSQFERRNSELVAELYTIE 424
+LEE K ELQ V L+E+L K+ VA S + ++E+V + IE
Sbjct: 721 ELEELRNKNLELQEQVKQLKEELEKEKSVAGSGNSGGWSDIDDNEVVEAVQPIE 774
>AC024850-1|AAF60860.2| 404|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 16 protein.
Length = 404
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 314 VNDLQEQLRKQVAESQAKFSQFERRNSELVAE 409
VN+ + QL KQ+ E Q KF + E+ + V E
Sbjct: 130 VNEYELQLAKQIEEDQLKFVEDEKNPMKYVVE 161
>Z93383-6|CAB07623.1| 283|Caenorhabditis elegans Hypothetical
protein F54B8.6 protein.
Length = 283
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = -1
Query: 330 SCRSFTVDCNSCVFLVNSSKSRFAHFNFNSVILCSC 223
+C F NSC + ++ + HF+ ++ +C C
Sbjct: 156 NCDVFKCTVNSCYYNYYLTQEQIVHFSIGTMTICFC 191
>Z81107-1|CAB03225.1| 258|Caenorhabditis elegans Hypothetical
protein R07H5.1 protein.
Length = 258
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 284 TKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAELYTI 421
T++ ++LQS V+DLQ ++ + Q + SE+ LY++
Sbjct: 124 TEEIRQLQSQVDDLQNSIKFIMDSVSQTTQQLATQQSEISRALYSV 169
>Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical
protein T13H5.2 protein.
Length = 408
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 20 FMPLTLIRNRDSIKQHWRELLENNTVNNRII 112
F+P+TL N K +W LENN +N I+
Sbjct: 310 FVPITLEGNVPGRKLYWWWRLENNDINFSIL 340
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = +2
Query: 248 KLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAELY 415
+++ R+LE ++ ELQ + +E+ R + + + + ERR +ELVA+++
Sbjct: 464 RIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRREEERREAELVADVH 519
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = +2
Query: 248 KLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAELY 415
+++ R+LE ++ ELQ + +E+ R + + + + ERR +ELVA+++
Sbjct: 464 RIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRREEERREAELVADVH 519
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = +2
Query: 248 KLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAELY 415
+++ R+LE ++ ELQ + +E+ R + + + + ERR +ELVA+++
Sbjct: 464 RIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRREEERREAELVADVH 519
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/56 (26%), Positives = 32/56 (57%)
Frame = +2
Query: 248 KLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAELY 415
+++ R+LE ++ ELQ + +E+ R + + + + ERR +ELVA+++
Sbjct: 464 RIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRREEERREAELVADVH 519
>AC024875-7|AAK29987.2| 97|Caenorhabditis elegans Knl (kinetochore
null) bindingprotein protein 4 protein.
Length = 97
Score = 27.5 bits (58), Expect = 5.5
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 233 KITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLR-KQVAESQAKFSQFERRNSELVAE 409
+I ++ A+R LEE +K + ++ + DLQEQ + K+ A S K +F+ ++ E
Sbjct: 38 QIINKEMDEADRKLEETLEKRKLVEKQLEDLQEQYKVKEFAFSLQK--EFQDELKKVAEE 95
Query: 410 LY 415
++
Sbjct: 96 IF 97
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 27.1 bits (57), Expect = 7.2
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Frame = +2
Query: 221 KHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRK---QVAESQAKFSQFER-- 385
K + K+ E LK A +++E TK+ ++++T+ +E L ++AE+ + ++ +R
Sbjct: 1063 KAKRKV-EGDLKVAQENIDEITKQKHDVETTLKRKEEDLHHTNAKLAENNSIIAKLQRLI 1121
Query: 386 -----RNSELVAEL 412
RN+EL EL
Sbjct: 1122 KELTARNAELEEEL 1135
>Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 248 KLKWANRDLE-EFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAEL 412
K+K DLE E T+ T +N + +L QV E + RN EL AE+
Sbjct: 128 KIKRKTDDLETELTRLTAR-NEVMNQHRIRLLSQVEEQMRMLENIKSRNPELEAEI 182
>Z73972-4|CAA98260.1| 666|Caenorhabditis elegans Hypothetical
protein F15H10.7 protein.
Length = 666
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Frame = +2
Query: 23 MPLTLIRNRDSIKQHWRELLENNTVNNRII----DLND 124
MP IR D IK+ + +++EN VN++++ D+ND
Sbjct: 428 MPFHSIRIPDGIKKKYPQIVENLMVNSKLMTTQFDVND 465
>Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical
protein C50F4.11 protein.
Length = 679
Score = 27.1 bits (57), Expect = 7.2
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +2
Query: 164 KNSQVEHKMTMLNCDYAMLKHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRK 343
+ + ++ L D+ +K + + KL DLE +K ELQ V L+++
Sbjct: 80 EKESAQRQLVTLREDHERMKQMMQTNQAKLAEKTIDLETNREKMLELQEQVELLKQERDD 139
Query: 344 QVAE 355
+AE
Sbjct: 140 TIAE 143
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 27.1 bits (57), Expect = 7.2
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Frame = +2
Query: 221 KHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRK---QVAESQAKFSQFER-- 385
K + K+ E LK A +++E TK+ ++++T+ +E L ++AE+ + ++ +R
Sbjct: 1063 KAKRKV-EGDLKVAQENIDEITKQKHDVETTLKRKEEDLHHTNAKLAENNSIIAKLQRLI 1121
Query: 386 -----RNSELVAEL 412
RN+EL EL
Sbjct: 1122 KELTARNAELEEEL 1135
>U29380-17|AAA68733.3| 736|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform a protein.
Length = 736
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = +2
Query: 245 LKLKWANRDLEE----FTKKTQELQSTVNDLQEQLRK 343
+ LK N LEE TK+ +ELQ + DLQE L K
Sbjct: 533 ITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLK 569
>U29380-16|AAS60254.1| 761|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform c protein.
Length = 761
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = +2
Query: 245 LKLKWANRDLEE----FTKKTQELQSTVNDLQEQLRK 343
+ LK N LEE TK+ +ELQ + DLQE L K
Sbjct: 533 ITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLK 569
>U29380-15|AAS60253.1| 777|Caenorhabditis elegans Zygote defective:
embryonic lethalprotein 12, isoform b protein.
Length = 777
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = +2
Query: 245 LKLKWANRDLEE----FTKKTQELQSTVNDLQEQLRK 343
+ LK N LEE TK+ +ELQ + DLQE L K
Sbjct: 533 ITLKSKNGVLEEEKLFATKQIEELQQQIEDLQENLLK 569
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 275 EEFTKKTQELQSTVNDLQE 331
++FT KT+EL +TVN L E
Sbjct: 1345 QQFTSKTRELATTVNQLVE 1363
>AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 248 KLKWANRDLE-EFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSELVAEL 412
K+K DLE E T+ T +N + +L QV E + RN EL AE+
Sbjct: 128 KIKRKTDDLETELTRLTAR-NEVMNQHRIRLLSQVEEQMRMLENIKSRNPELEAEI 182
>AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical
protein Y68A4A.5 protein.
Length = 572
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -1
Query: 357 DSATCLRNCSCRSFTVDCNSCVFLVNSSKSRF 262
+ ATC N CR T DC + RF
Sbjct: 211 EKATCTANYDCRRMTYDCRRLCHTCSQMPPRF 242
>AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein.
Length = 679
Score = 27.1 bits (57), Expect = 7.2
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +2
Query: 164 KNSQVEHKMTMLNCDYAMLKHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRK 343
+ + ++ L D+ +K + + KL DLE +K ELQ V L+++
Sbjct: 80 EKESAQRQLVTLREDHERMKQMMQTNQAKLAEKTIDLETNREKMLELQEQVELLKQERDD 139
Query: 344 QVAE 355
+AE
Sbjct: 140 TIAE 143
>AF098501-7|AAC67402.1| 199|Caenorhabditis elegans Hypothetical
protein H28G03.3 protein.
Length = 199
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +2
Query: 170 SQVEHKMTMLNCDYAMLKHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQL 337
S VE++ +Y L+ EH + +K +R++E K + L+ +++EQ+
Sbjct: 97 STVEYEQMKNKNEY--LQREHAEMQKSIKRKDREIERLRSKNRRLEEEGRNIREQM 150
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 275 EEFTKKTQELQSTVNDLQE 331
++FT KT+EL +TVN L E
Sbjct: 1345 QQFTSKTRELATTVNQLVE 1363
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 26.6 bits (56), Expect = 9.5
Identities = 9/47 (19%), Positives = 26/47 (55%)
Frame = +2
Query: 221 KHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQ 361
+ E ++ + ++ A DL+ +K E + + + ++ +RK+ +E +
Sbjct: 316 RDEVEVQDAEIAEAREDLDAKKRKVLEFEEKIRECEQSIRKKTSEKK 362
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical
protein T06E4.1 protein.
Length = 1295
Score = 26.6 bits (56), Expect = 9.5
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +2
Query: 245 LKLKWANRDLEEFTKKTQELQSTVNDLQEQLRK---QVAESQAKFSQFERRNSELVAELY 415
LK+ +E++ KK ELQ + EQL+K + Q K+ + E ++ V
Sbjct: 331 LKVDVMQHSIEDYEKKFVELQEMKEEADEQLQKAKEDIETLQMKYVELETTINKEVFSNS 390
Query: 416 TIEMSK 433
IE K
Sbjct: 391 EIETLK 396
>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 26.6 bits (56), Expect = 9.5
Identities = 9/47 (19%), Positives = 26/47 (55%)
Frame = +2
Query: 221 KHEHKITELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQ 361
+ E ++ + ++ A DL+ +K E + + + ++ +RK+ +E +
Sbjct: 316 RDEVEVQDAEIAEAREDLDAKKRKVLEFEEKIRECEQSIRKKTSEKK 362
>U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like
protein protein 6 protein.
Length = 928
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 317 NDLQEQLRKQVAESQAKFSQFERRNSELVAE 409
N+ E+LR+Q+AE+Q + + E+ + +AE
Sbjct: 397 NEEIEKLRRQLAENQKEMEEMEKSWQQKIAE 427
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = +2
Query: 161 AKNSQVEHKMTMLNCDYAMLKHEHKITELKLKWANRDLEEF 283
A ++ M LN D +++ +HK + ++ A+ +L E+
Sbjct: 393 AWRDKMSENMKQLNADLVVIEKQHKTVKDQISLASEELHEY 433
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 242 ELKLKWANRDLEEFTKKTQELQSTVNDLQEQLRKQVAESQAKFSQFERRNSE 397
EL+ + + LEE+ K+ QE+ ++++Q Q E Q FE+R E
Sbjct: 199 ELQQQRHKQQLEEYEKRNQEILRREEEIKQQ--NQEREKQIN-DDFEKRKQE 247
>AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like
protein KLP-6 protein.
Length = 928
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 317 NDLQEQLRKQVAESQAKFSQFERRNSELVAE 409
N+ E+LR+Q+AE+Q + + E+ + +AE
Sbjct: 397 NEEIEKLRRQLAENQKEMEEMEKSWQQKIAE 427
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,049,537
Number of Sequences: 27780
Number of extensions: 157991
Number of successful extensions: 733
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -