Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23i14
         (699 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0025 - 25165438-25165708,25165807-25166048,25166191-251662...    30   1.5  
01_06_0808 + 32134765-32136570                                         29   2.7  

>02_05_0025 -
           25165438-25165708,25165807-25166048,25166191-25166222,
           25167174-25167231,25167331-25167438
          Length = 236

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/59 (28%), Positives = 32/59 (54%)
 Frame = -3

Query: 628 EVATKIFIEAFEYSYTNTNAISMDKTDEFDFIKQPTLKSLPDARPPSLLTSVMNERKRK 452
           EV ++++   F++  T+TN+  ++   +FD +  PT +       P+ L S   +RKRK
Sbjct: 102 EVCSRVW---FDWFGTSTNSRPVESETQFDTVSDPT-RQTDSITEPTFLWSEEEKRKRK 156


>01_06_0808 + 32134765-32136570
          Length = 601

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 13  YETDGGRHYIKSDGRSHRQQYRRYHP 90
           Y T  GR+Y + DG  H ++Y +Y P
Sbjct: 558 YRTFTGRYYSRLDGTRHLERYIKYKP 583


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,521,936
Number of Sequences: 37544
Number of extensions: 229639
Number of successful extensions: 586
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)