Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc23i14
         (699 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC094751-1|AAH94751.1|  894|Homo sapiens exocyst complex compone...    32   2.3  
AK027413-1|BAB55095.1|  879|Homo sapiens protein ( Homo sapiens ...    32   2.3  
AK001755-1|BAA91886.1|  894|Homo sapiens protein ( Homo sapiens ...    32   2.3  

>BC094751-1|AAH94751.1|  894|Homo sapiens exocyst complex component
           1 protein.
          Length = 894

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 22/116 (18%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
 Frame = -3

Query: 694 NECLENLDNPVTDEHHLLTFGKEVATKIFIEAFEYSYTNTNAISMDKTDEFDFIKQPTLK 515
           N+ +   D  V DE+  L   +E   +I +E  EY+ +N  A +   + E   +    ++
Sbjct: 146 NQSVTGGDEEVVDEYQELNAREEQDIEIMMEGCEYAISNAEAFAEKLSRELQVLDGANIQ 205

Query: 514 S-LPDARPPSLLTSVMNERKRKLQNTNSKAKCLLXXXXXXXXXPQLRKLEKKNHLL 350
           S +   +  ++L  +++E  +++     K               Q+ ++ + NHL+
Sbjct: 206 SIMASEKQVNILMKLLDEALKEVDQIELKLSS--YEEMLQSVKEQMDQISESNHLI 259


>AK027413-1|BAB55095.1|  879|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14507 fis, clone NT2RM1000399. ).
          Length = 879

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 22/116 (18%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
 Frame = -3

Query: 694 NECLENLDNPVTDEHHLLTFGKEVATKIFIEAFEYSYTNTNAISMDKTDEFDFIKQPTLK 515
           N+ +   D  V DE+  L   +E   +I +E  EY+ +N  A +   + E   +    ++
Sbjct: 146 NQSVTGGDEEVVDEYQELNAREEQDIEIMMEGCEYAISNAEAFAEKLSRELQVLDGANIQ 205

Query: 514 S-LPDARPPSLLTSVMNERKRKLQNTNSKAKCLLXXXXXXXXXPQLRKLEKKNHLL 350
           S +   +  ++L  +++E  +++     K               Q+ ++ + NHL+
Sbjct: 206 SIMASEKQVNILMKLLDEALKEVDQIELKLSS--YEEMLQSVKEQMDQISESNHLI 259


>AK001755-1|BAA91886.1|  894|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10893 fis, clone NT2RP4002791. ).
          Length = 894

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 22/116 (18%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
 Frame = -3

Query: 694 NECLENLDNPVTDEHHLLTFGKEVATKIFIEAFEYSYTNTNAISMDKTDEFDFIKQPTLK 515
           N+ +   D  V DE+  L   +E   +I +E  EY+ +N  A +   + E   +    ++
Sbjct: 146 NQSVTGGDEEVVDEYQELNAREEQDIEIMMEGCEYAISNAEAFAEKLSRELQVLDGANIQ 205

Query: 514 S-LPDARPPSLLTSVMNERKRKLQNTNSKAKCLLXXXXXXXXXPQLRKLEKKNHLL 350
           S +   +  ++L  +++E  +++     K               Q+ ++ + NHL+
Sbjct: 206 SIMASEKQVNILMKLLDEALKEVDQIELKLSS--YEEMLQSVKEQMDQISESNHLI 259


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,388,098
Number of Sequences: 237096
Number of extensions: 1279004
Number of successful extensions: 2511
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2505
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)