Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc23i10
(342 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118698-1|AAM50558.1| 570|Drosophila melanogaster AT19257p pro... 29 2.1
AE014296-2960|AAN11700.1| 573|Drosophila melanogaster CG32181-P... 29 2.1
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi... 28 2.8
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA... 28 2.8
X53959-1|CAA37910.1| 1480|Drosophila melanogaster slit protein p... 27 8.4
BT001382-1|AAN71137.1| 152|Drosophila melanogaster GH03029p pro... 27 8.4
AF126540-1|AAD26567.1| 1504|Drosophila melanogaster slit protein... 27 8.4
AE014296-823|AAF47882.2| 152|Drosophila melanogaster CG15012-PB... 27 8.4
AE013599-2126|AAF58097.1| 1504|Drosophila melanogaster CG8355-PC... 27 8.4
AE013599-2125|AAF58098.1| 1480|Drosophila melanogaster CG8355-PA... 27 8.4
AE013599-2124|AAM70966.1| 1469|Drosophila melanogaster CG8355-PB... 27 8.4
>AY118698-1|AAM50558.1| 570|Drosophila melanogaster AT19257p
protein.
Length = 570
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 35 NFRDHYRAARDNTHNHSCYRT*PLRSCI*KYVRFGRCGVD 154
N+R++ + ++THNHS R P C K RC D
Sbjct: 87 NYRNNKTSHHNSTHNHSDKRIKPQTPCELKVPSGNRCPTD 126
>AE014296-2960|AAN11700.1| 573|Drosophila melanogaster CG32181-PA
protein.
Length = 573
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 35 NFRDHYRAARDNTHNHSCYRT*PLRSCI*KYVRFGRCGVD 154
N+R++ + ++THNHS R P C K RC D
Sbjct: 87 NYRNNKTSHHNSTHNHSDKRIKPQTPCELKVPSGNRCPTD 126
>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
ubiquitin-conjugatingenzyme protein.
Length = 4876
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 120 KNMSVLDAVEWIANRAFECKDKFIINKLTNADALQHLKFLKVNYNKVVDEHVSTSQY 290
K +S L++V+ + + I++KLT A L L L+ K ++EH+S +
Sbjct: 1604 KTLSSLNSVKQTLKEEVKKEKADIMDKLTIAKFLPKLSLLESYMQKKINEHISFDDF 1660
>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
protein.
Length = 4876
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 120 KNMSVLDAVEWIANRAFECKDKFIINKLTNADALQHLKFLKVNYNKVVDEHVSTSQY 290
K +S L++V+ + + I++KLT A L L L+ K ++EH+S +
Sbjct: 1604 KTLSSLNSVKQTLKEEVKKEKADIMDKLTIAKFLPKLSLLESYMQKKINEHISFDDF 1660
>X53959-1|CAA37910.1| 1480|Drosophila melanogaster slit protein
protein.
Length = 1480
Score = 26.6 bits (56), Expect = 8.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 263 NNFVIIYFQKFQMLQSVRVGQFVDNKFVFAFKRSVCNPLHSVQ 135
NN +IY FQ L +R+ Q DN+ + +R+ L S++
Sbjct: 110 NNLTVIYETDFQRLTKLRMLQLTDNQ-IHTIERNSFQDLVSLE 151
>BT001382-1|AAN71137.1| 152|Drosophila melanogaster GH03029p
protein.
Length = 152
Score = 26.6 bits (56), Expect = 8.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 146 HSVQNGHIFIYTSGAVTFC 90
H + GH+FI G ++FC
Sbjct: 46 HQITTGHVFIGIFGTISFC 64
>AF126540-1|AAD26567.1| 1504|Drosophila melanogaster slit protein
protein.
Length = 1504
Score = 26.6 bits (56), Expect = 8.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 263 NNFVIIYFQKFQMLQSVRVGQFVDNKFVFAFKRSVCNPLHSVQ 135
NN +IY FQ L +R+ Q DN+ + +R+ L S++
Sbjct: 110 NNLTVIYETDFQRLTKLRMLQLTDNQ-IHTIERNSFQDLVSLE 151
>AE014296-823|AAF47882.2| 152|Drosophila melanogaster CG15012-PB
protein.
Length = 152
Score = 26.6 bits (56), Expect = 8.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 146 HSVQNGHIFIYTSGAVTFC 90
H + GH+FI G ++FC
Sbjct: 46 HQITTGHVFIGIFGTISFC 64
>AE013599-2126|AAF58097.1| 1504|Drosophila melanogaster CG8355-PC,
isoform C protein.
Length = 1504
Score = 26.6 bits (56), Expect = 8.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 263 NNFVIIYFQKFQMLQSVRVGQFVDNKFVFAFKRSVCNPLHSVQ 135
NN +IY FQ L +R+ Q DN+ + +R+ L S++
Sbjct: 110 NNLTVIYETDFQRLTKLRMLQLTDNQ-IHTIERNSFQDLVSLE 151
>AE013599-2125|AAF58098.1| 1480|Drosophila melanogaster CG8355-PA,
isoform A protein.
Length = 1480
Score = 26.6 bits (56), Expect = 8.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 263 NNFVIIYFQKFQMLQSVRVGQFVDNKFVFAFKRSVCNPLHSVQ 135
NN +IY FQ L +R+ Q DN+ + +R+ L S++
Sbjct: 110 NNLTVIYETDFQRLTKLRMLQLTDNQ-IHTIERNSFQDLVSLE 151
>AE013599-2124|AAM70966.1| 1469|Drosophila melanogaster CG8355-PB,
isoform B protein.
Length = 1469
Score = 26.6 bits (56), Expect = 8.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 263 NNFVIIYFQKFQMLQSVRVGQFVDNKFVFAFKRSVCNPLHSVQ 135
NN +IY FQ L +R+ Q DN+ + +R+ L S++
Sbjct: 110 NNLTVIYETDFQRLTKLRMLQLTDNQ-IHTIERNSFQDLVSLE 151
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,642,749
Number of Sequences: 53049
Number of extensions: 222771
Number of successful extensions: 583
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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